Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PSEN1P49768 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PSEN1P49768 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.34□□□□□ -1.39
PSEN1P49768 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PSEN1P49768 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PSEN1P49768 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PSEN1P49768 RNA5SP375-201ENST00000362975 119 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 RNU6-324P-201ENST00000363957 106 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 RNU6-32P-201ENST00000383948 107 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 RNU6-793P-201ENST00000384233 104 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 RNU6-13P-201ENST00000384248 107 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 RNU6-12P-201ENST00000384604 107 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 RNU6-41P-201ENST00000384741 107 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.34□□□□□ -1.39
PSEN1P49768 EIF5AP4-201ENST00000441206 465 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.34□□□□□ -1.39
PSEN1P49768 HSPE1P13-201ENST00000451143 297 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 EIF4A1P11-201ENST00000451239 222 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC6.34□□□□□ -1.39
PSEN1P49768 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.34□□□□□ -1.39
PSEN1P49768 AC245047.8-201ENST00000456455 284 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 RPL31P61-201ENST00000496160 376 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 UBE2CP3-201ENST00000502715 450 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 AC016632.1-201ENST00000503994 196 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC6.34□□□□□ -1.39
PSEN1P49768 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PSEN1P49768 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.34□□□□□ -1.39
PSEN1P49768 HSPE1P4-201ENST00000550617 308 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 MIR6793-201ENST00000612376 63 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 MIR6861-201ENST00000618657 64 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.34□□□□□ -1.39
PSEN1P49768 AC093535.2-201ENST00000624769 2326 ntBASIC6.34□□□□□ -1.39
PSEN1P49768 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PSEN1P49768 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PSEN1P49768 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PSEN1P49768 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PSEN1P49768 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.34□□□□□ -1.4
PSEN1P49768 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
PSEN1P49768 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
PSEN1P49768 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
PSEN1P49768 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PSEN1P49768 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PSEN1P49768 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PSEN1P49768 GVINP1-202ENST00000531871 7271 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PSEN1P49768 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PSEN1P49768 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.33□□□□□ -1.4
PSEN1P49768 RN7SKP69-201ENST00000365390 305 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 Y_RNA.393-201ENST00000383936 102 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 SNORA66-201ENST00000384792 133 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 U3.40-201ENST00000408706 208 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 RN7SKP151-201ENST00000410230 316 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 AL160275.2-201ENST00000412010 394 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.33□□□□□ -1.4
PSEN1P49768 Y_RNA.651-201ENST00000459380 103 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC6.33□□□□□ -1.4
PSEN1P49768 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.33□□□□□ -1.4
PSEN1P49768 RNA5SP340-201ENST00000517132 107 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.33□□□□□ -1.4
PSEN1P49768 AP004609.2-201ENST00000532177 190 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 RNU4ATAC-201ENST00000580972 127 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.33□□□□□ -1.4
PSEN1P49768 AL670379.3-201ENST00000605040 251 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PSEN1P49768 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PSEN1P49768 AC026951.1-201ENST00000559530 2459 ntBASIC6.33□□□□□ -1.4
PSEN1P49768 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PSEN1P49768 LINC01963-201ENST00000562038 3148 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PSEN1P49768 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PSEN1P49768 RNU1-140P-201ENST00000365040 165 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.32□□□□□ -1.4
PSEN1P49768 RNY4P30-201ENST00000410216 95 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 AC096649.2-201ENST00000416186 393 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.32□□□□□ -1.4
PSEN1P49768 AL356867.1-201ENST00000429623 299 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 RPL12P11-201ENST00000439970 501 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.32□□□□□ -1.4
PSEN1P49768 snoU13.6-201ENST00000458785 104 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 SNRPGP7-201ENST00000469016 106 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 RPS29P24-201ENST00000486345 171 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 RNA5SP291-201ENST00000517222 105 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PSEN1P49768 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.32□□□□□ -1.4
PSEN1P49768 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PSEN1P49768 AL136228.1-201ENST00000622221 319 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 snoZ196.1-201ENST00000625269 89 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 AC008555.8-201ENST00000623602 2168 ntBASIC6.32□□□□□ -1.4
PSEN1P49768 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PSEN1P49768 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PSEN1P49768 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PSEN1P49768 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PSEN1P49768 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PSEN1P49768 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PSEN1P49768 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PSEN1P49768 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.31□□□□□ -1.4
PSEN1P49768 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PSEN1P49768 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms