Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 TBCAP2-201ENST00000416175 326 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 TOMM20P4-201ENST00000427861 435 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.38□□□□□ -1.39
PRIM1P49642 AC090804.1-201ENST00000448870 490 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.38□□□□□ -1.39
PRIM1P49642 RPL23AP81-201ENST00000455252 467 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 AC087588.1-201ENST00000462203 316 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 RNU6-1012P-201ENST00000516606 109 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 AC022790.1-201ENST00000522872 204 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PRIM1P49642 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.38□□□□□ -1.39
PRIM1P49642 AC027288.2-201ENST00000553028 243 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 MIR3144-201ENST00000579460 79 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 AC123912.5-201ENST00000605470 343 ntBASIC6.38□□□□□ -1.39
PRIM1P49642 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PRIM1P49642 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PRIM1P49642 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.38□□□□□ -1.39
PRIM1P49642 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PRIM1P49642 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PRIM1P49642 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PRIM1P49642 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.37□□□□□ -1.39
PRIM1P49642 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.37□□□□□ -1.39
PRIM1P49642 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
PRIM1P49642 SNORD50.1-201ENST00000362987 71 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 Y_RNA.292-201ENST00000364904 97 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 AC114755.2-201ENST00000413520 361 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC6.37□□□□□ -1.39
PRIM1P49642 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.37□□□□□ -1.39
PRIM1P49642 AC016831.4-201ENST00000438302 307 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 RPS5P7-201ENST00000456664 608 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.37□□□□□ -1.39
PRIM1P49642 AC026402.1-201ENST00000513642 170 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 RNA5SP464-201ENST00000516251 108 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC6.37□□□□□ -1.39
PRIM1P49642 TRAV37-201ENST00000553906 342 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 AL157871.3-201ENST00000557231 293 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.37□□□□□ -1.39
PRIM1P49642 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.37□□□□□ -1.39
PRIM1P49642 AC108706.1-201ENST00000611053 297 ntBASIC6.37□□□□□ -1.39
PRIM1P49642 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.37□□□□□ -1.39
PRIM1P49642 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRIM1P49642 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
PRIM1P49642 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.36□□□□□ -1.39
PRIM1P49642 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRIM1P49642 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PRIM1P49642 Y_RNA.33-201ENST00000362591 102 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 Y_RNA.233-201ENST00000364407 101 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 AL357515.1-201ENST00000402967 542 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.36□□□□□ -1.39
PRIM1P49642 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC6.36□□□□□ -1.39
PRIM1P49642 AL450023.3-201ENST00000440592 271 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 AL031659.1-201ENST00000447075 539 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 RNU7-87P-201ENST00000459343 62 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 AC010618.1-201ENST00000469924 477 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 RNU2-31P-201ENST00000516954 155 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.36□□□□□ -1.39
PRIM1P49642 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.36□□□□□ -1.39
PRIM1P49642 SNORD113-5-201ENST00000607261 78 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.36□□□□□ -1.39
PRIM1P49642 AL451142.2-201ENST00000429076 2090 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.36□□□□□ -1.39
PRIM1P49642 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.36□□□□□ -1.39
PRIM1P49642 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.36□□□□□ -1.39
PRIM1P49642 AC006484.1-201ENST00000435086 1884 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.36□□□□□ -1.39
PRIM1P49642 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.36□□□□□ -1.39
PRIM1P49642 HAUS6P2-201ENST00000433254 2404 ntBASIC6.36□□□□□ -1.39
PRIM1P49642 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.36□□□□□ -1.39
PRIM1P49642 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PRIM1P49642 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.35□□□□□ -1.39
PRIM1P49642 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.35□□□□□ -1.39
PRIM1P49642 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRIM1P49642 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRIM1P49642 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PRIM1P49642 MIR412-201ENST00000362142 91 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PRIM1P49642 RNU6-394P-201ENST00000410735 107 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 SNORD56-201ENST00000413522 71 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 BMS1P22-201ENST00000414726 313 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC6.35□□□□□ -1.39
PRIM1P49642 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PRIM1P49642 AC079354.2-201ENST00000453523 154 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 RNU1-86P-201ENST00000516108 154 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 RNU6-346P-201ENST00000516288 111 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 RNU6-313P-201ENST00000516317 112 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 RNU1-107P-201ENST00000516617 154 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 AC027369.5-201ENST00000533838 755 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.35□□□□□ -1.39
PRIM1P49642 MIR3160-1-201ENST00000577972 85 ntBASIC6.35□□□□□ -1.39
PRIM1P49642 AC022726.1-201ENST00000587475 207 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms