Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 CCDC58P2-201ENST00000417131 366 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 AC092634.6-201ENST00000418558 192 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCA1P38398 ARPC3P1-201ENST00000437218 533 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 SDCBPP1-201ENST00000440192 890 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 AL359385.1-201ENST00000456509 365 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 snoU109.3-201ENST00000459477 145 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 RPS26P21-201ENST00000475397 348 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 RNU6-798P-201ENST00000516912 103 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 AC104986.1-201ENST00000517978 436 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 SLC2A13P1-201ENST00000531560 322 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCA1P38398 AC104763.3-201ENST00000613765 618 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 RMST_2.1-201ENST00000617263 136 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.27□□□□□ -2.05
BRCA1P38398 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.27□□□□□ -2.05
BRCA1P38398 Y_RNA.122-201ENST00000363331 96 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
BRCA1P38398 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
BRCA1P38398 MCTS2P-201ENST00000394552 546 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AL356421.1-201ENST00000403255 413 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.26□□□□□ -2.05
BRCA1P38398 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.26□□□□□ -2.05
BRCA1P38398 RPL7P37-201ENST00000425095 738 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 NANOGP2-201ENST00000435391 727 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 LSM1P1-201ENST00000438629 273 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 THAP5P1-201ENST00000439089 262 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.26□□□□□ -2.05
BRCA1P38398 RPL23AP20-201ENST00000447965 421 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 SNRPGP6-201ENST00000451124 220 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 RPL18AP17-201ENST00000455326 198 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AC108734.3-201ENST00000481241 1165 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
BRCA1P38398 CDC42P4-201ENST00000510507 563 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 RNU6-56P-201ENST00000516986 93 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 RNU6-467P-201ENST00000517027 110 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.26□□□□□ -2.05
BRCA1P38398 OR4K8P-201ENST00000578842 1048 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AC011451.2-201ENST00000604303 598 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 BX248123.2-201ENST00000606318 124 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AP000254.1-201ENST00000609934 520 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 MIR6504-201ENST00000613520 61 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.26□□□□□ -2.05
BRCA1P38398 AC008669.1-201ENST00000565823 2178 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
BRCA1P38398 RNU6-217P-201ENST00000384164 104 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 RPS7P9-201ENST00000414704 586 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 TIMM9P2-201ENST00000419324 266 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.26□□□□□ -2.05
BRCA1P38398 AC104564.1-201ENST00000493028 407 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AC093801.2-201ENST00000503966 1050 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.26□□□□□ -2.05
BRCA1P38398 AC087808.1-201ENST00000520501 361 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.26□□□□□ -2.05
BRCA1P38398 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.26□□□□□ -2.05
BRCA1P38398 DEFB131D-201ENST00000526803 184 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.26□□□□□ -2.05
BRCA1P38398 NBEAP1-201ENST00000554452 979 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AP001429.1-201ENST00000602568 530 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 BBIP1P1-201ENST00000602999 279 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 DUXAP3-201ENST00000603616 594 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AL136363.1-201ENST00000605349 337 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AL138478.1-201ENST00000612252 832 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 AL512427.1-201ENST00000618593 349 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
BRCA1P38398 AL079343.1-201ENST00000572358 1771 ntBASIC2.26□□□□□ -2.05
BRCA1P38398 Y_RNA.311-201ENST00000365068 96 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 RNU6-198P-201ENST00000384258 104 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 RNU1-57P-201ENST00000384491 166 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
BRCA1P38398 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.25□□□□□ -2.05
BRCA1P38398 AC026414.1-201ENST00000504046 698 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.25□□□□□ -2.05
BRCA1P38398 SNORA31.22-201ENST00000517204 135 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 AC023632.1-201ENST00000518463 375 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.25□□□□□ -2.05
BRCA1P38398 CBX3P4-201ENST00000538909 354 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.25□□□□□ -2.05
BRCA1P38398 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.25□□□□□ -2.05
BRCA1P38398 AC124947.2-202ENST00000552735 133 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 WISP1-OT1-201ENST00000602893 642 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 AC013444.2-201ENST00000603317 787 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 AC034102.8-201ENST00000615146 484 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 AL357080.1-201ENST00000617394 239 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 AC010975.3-201ENST00000618727 978 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 AC106858.1-201ENST00000637497 429 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.25□□□□□ -2.05
BRCA1P38398 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.24□□□□□ -2.05
BRCA1P38398 RNU6-223P-201ENST00000362830 107 ntBASIC2.24□□□□□ -2.05
BRCA1P38398 RNU6-878P-201ENST00000384578 110 ntBASIC2.24□□□□□ -2.05
BRCA1P38398 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BRCA1P38398 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BRCA1P38398 RPL26P6-201ENST00000440913 438 ntBASIC2.24□□□□□ -2.05
BRCA1P38398 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.24□□□□□ -2.05
BRCA1P38398 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BRCA1P38398 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.24□□□□□ -2.05
BRCA1P38398 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BRCA1P38398 AC092436.3-201ENST00000511788 257 ntBASIC2.24□□□□□ -2.05
BRCA1P38398 AC107393.1-201ENST00000512403 346 ntBASIC2.24□□□□□ -2.05
BRCA1P38398 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms