Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL590084.1-201ENST00000407885 387 ntBASIC1.03□□□□□ -2.24
SNCAP37840 MIR1303-201ENST00000408625 86 ntBASIC1.03□□□□□ -2.24
SNCAP37840 MIR1290-201ENST00000408735 78 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AC097499.1-201ENST00000444277 208 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AL049714.1-201ENST00000466686 347 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AC104164.3-201ENST00000467363 1258 ntBASIC1.03□□□□□ -2.24
SNCAP37840 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.03□□□□□ -2.24
SNCAP37840 AC022616.2-201ENST00000523185 300 ntBASIC1.03□□□□□ -2.24
SNCAP37840 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.03□□□□□ -2.24
SNCAP37840 RRN3P3-201ENST00000549207 578 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AL161670.1-201ENST00000554348 137 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AC087465.1-201ENST00000560574 245 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AP001269.3-201ENST00000588718 329 ntBASIC1.03□□□□□ -2.24
SNCAP37840 BNIP3P25-201ENST00000596023 559 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AC016925.2-201ENST00000605108 242 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AC055876.5-201ENST00000605667 259 ntBASIC1.03□□□□□ -2.24
SNCAP37840 AL590410.1-201ENST00000617925 333 ntBASIC1.03□□□□□ -2.24
SNCAP37840 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
SNCAP37840 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
SNCAP37840 DEFB108F-201ENST00000344638 222 ntBASIC1.02□□□□□ -2.25
SNCAP37840 SNORD26-201ENST00000384147 75 ntBASIC1.02□□□□□ -2.25
SNCAP37840 RNA5SP212-201ENST00000391223 107 ntBASIC1.02□□□□□ -2.25
SNCAP37840 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
SNCAP37840 SPA17P1-201ENST00000416656 452 ntBASIC1.02□□□□□ -2.25
SNCAP37840 SFR1P2-201ENST00000421841 730 ntBASIC1.02□□□□□ -2.25
SNCAP37840 OOSP1P1-201ENST00000423265 274 ntBASIC1.02□□□□□ -2.25
SNCAP37840 MTND5P25-201ENST00000430499 799 ntBASIC1.02□□□□□ -2.25
SNCAP37840 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.02□□□□□ -2.25
SNCAP37840 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.02□□□□□ -2.25
SNCAP37840 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.02□□□□□ -2.25
SNCAP37840 TAAR7P-201ENST00000436141 242 ntBASIC1.02□□□□□ -2.25
SNCAP37840 MRPL35P4-201ENST00000453682 566 ntBASIC1.02□□□□□ -2.25
SNCAP37840 RNU1-123P-201ENST00000458950 160 ntBASIC1.02□□□□□ -2.25
SNCAP37840 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.02□□□□□ -2.25
SNCAP37840 AC147055.4-201ENST00000504399 745 ntBASIC1.02□□□□□ -2.25
SNCAP37840 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SNCAP37840 AL359273.1-201ENST00000510918 627 ntBASIC1.02□□□□□ -2.25
SNCAP37840 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.02□□□□□ -2.25
SNCAP37840 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.02□□□□□ -2.25
SNCAP37840 DEFB108D-201ENST00000527787 222 ntBASIC1.02□□□□□ -2.25
SNCAP37840 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.02□□□□□ -2.25
SNCAP37840 AP000916.1-201ENST00000533869 835 ntBASIC1.02□□□□□ -2.25
SNCAP37840 AC011611.5-201ENST00000552477 578 ntBASIC1.02□□□□□ -2.25
SNCAP37840 MTCYBP27-201ENST00000555160 670 ntBASIC1.02□□□□□ -2.25
SNCAP37840 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.02□□□□□ -2.25
SNCAP37840 MIR3126-201ENST00000577443 74 ntBASIC1.02□□□□□ -2.25
SNCAP37840 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
SNCAP37840 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SNCAP37840 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SNCAP37840 U3.13-201ENST00000364804 214 ntBASIC1.01□□□□□ -2.25
SNCAP37840 MIR23A-201ENST00000385245 73 ntBASIC1.01□□□□□ -2.25
SNCAP37840 OR51A5P-201ENST00000415429 942 ntBASIC1.01□□□□□ -2.25
SNCAP37840 PAICSP7-201ENST00000419829 962 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.01□□□□□ -2.25
SNCAP37840 Z85994.2-201ENST00000434327 452 ntBASIC1.01□□□□□ -2.25
SNCAP37840 ARL5AP3-201ENST00000439327 386 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AC092393.1-201ENST00000439625 742 ntBASIC1.01□□□□□ -2.25
SNCAP37840 MTCO1P48-201ENST00000448024 1096 ntBASIC1.01□□□□□ -2.25
SNCAP37840 RPS29P29-201ENST00000456396 171 ntBASIC1.01□□□□□ -2.25
SNCAP37840 SUMO2P2-201ENST00000456482 255 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.01□□□□□ -2.25
SNCAP37840 snoU109.4-201ENST00000458953 143 ntBASIC1.01□□□□□ -2.25
SNCAP37840 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.01□□□□□ -2.25
SNCAP37840 MTCYBP18-201ENST00000501056 747 ntBASIC1.01□□□□□ -2.25
SNCAP37840 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.01□□□□□ -2.25
SNCAP37840 AF213884.2-201ENST00000510417 903 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AC093752.1-206ENST00000511823 336 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.01□□□□□ -2.25
SNCAP37840 AL391261.3-201ENST00000557194 520 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.01□□□□□ -2.25
SNCAP37840 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.01□□□□□ -2.25
SNCAP37840 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.01□□□□□ -2.25
SNCAP37840 AC016252.1-201ENST00000609721 474 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AC090132.2-201ENST00000615881 347 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AC040168.1-201ENST00000623594 991 ntBASIC1.01□□□□□ -2.25
SNCAP37840 AP003476.1-201ENST00000623984 516 ntBASIC1.01□□□□□ -2.25
SNCAP37840 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SNCAP37840 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1□□□□□ -2.25
SNCAP37840 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
SNCAP37840 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
SNCAP37840 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1□□□□□ -2.25
SNCAP37840 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
SNCAP37840 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
SNCAP37840 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1□□□□□ -2.25
SNCAP37840 MTND4LP10-201ENST00000435146 291 ntBASIC1□□□□□ -2.25
SNCAP37840 MTND6P13-201ENST00000443510 523 ntBASIC1□□□□□ -2.25
SNCAP37840 BMI1P1-201ENST00000445879 941 ntBASIC1□□□□□ -2.25
SNCAP37840 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1□□□□□ -2.25
SNCAP37840 AC233982.1-201ENST00000451247 436 ntBASIC1□□□□□ -2.25
SNCAP37840 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1□□□□□ -2.25
SNCAP37840 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1□□□□□ -2.25
SNCAP37840 RNU5A-7P-201ENST00000515979 116 ntBASIC1□□□□□ -2.25
SNCAP37840 HAUS1P3-201ENST00000523909 662 ntBASIC1□□□□□ -2.25
SNCAP37840 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1□□□□□ -2.25
SNCAP37840 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1□□□□□ -2.25
SNCAP37840 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1□□□□□ -2.25
SNCAP37840 HMGB1P51-201ENST00000605166 638 ntBASIC1□□□□□ -2.25
SNCAP37840 AL137246.1-201ENST00000607072 977 ntBASIC1□□□□□ -2.25
SNCAP37840 AC069294.1-201ENST00000608397 350 ntBASIC1□□□□□ -2.25
SNCAP37840 AL589743.7-201ENST00000612637 233 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms