Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A4P31645 snoU13.24-201ENST00000458998 104 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 RPS26P15-201ENST00000488067 348 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 RAC1P2-201ENST00000511164 579 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AC026726.1-201ENST00000512859 601 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AC112206.3-201ENST00000514578 389 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 Y_RNA.691-201ENST00000516611 103 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 NARSP2-201ENST00000518524 679 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A4P31645 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC6A4P31645 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A4P31645 AL121576.1-201ENST00000556055 276 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A4P31645 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC6A4P31645 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC6A4P31645 AC092807.2-201ENST00000609367 243 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AC005858.4-201ENST00000623191 700 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AC012442.3-202ENST00000636742 206 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 UBE3AP2-201ENST00000429033 2259 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 AP001350.1-201ENST00000601906 1524 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 MAPK10-253ENST00000641010 4072 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A4P31645 MTND4P23-201ENST00000447723 1363 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SLC6A4P31645 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A4P31645 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A4P31645 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A4P31645 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 Y_RNA.333-201ENST00000365274 102 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 RNA5SP235-201ENST00000365411 114 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 Y_RNA.373-201ENST00000365600 103 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A4P31645 Y_RNA.431-201ENST00000384086 102 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 MIR7-3-201ENST00000384898 110 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SLC6A4P31645 SNORA57.3-201ENST00000411095 141 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 RAB9AP3-201ENST00000412737 573 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC6A4P31645 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A4P31645 MTCO1P39-201ENST00000426148 480 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC6A4P31645 AL591704.1-201ENST00000432574 275 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 AC024082.2-201ENST00000434771 238 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A4P31645 SNORA71B-202ENST00000439232 272 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 RAB9AP1-201ENST00000449393 573 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A4P31645 AC004801.2-202ENST00000463559 283 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A4P31645 MTCO1P29-201ENST00000496868 288 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 TRBVA-201ENST00000498804 316 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 MLLT10P2-201ENST00000506434 249 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC6A4P31645 KLHL2P1-201ENST00000508691 521 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A4P31645 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC6A4P31645 RNA5SP208-201ENST00000516156 78 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 RN7SKP60-201ENST00000516985 239 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A4P31645 AC090281.1-201ENST00000523019 276 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC6A4P31645 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A4P31645 AC067852.3-201ENST00000589177 561 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A4P31645 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 CR392039.5-201ENST00000623201 510 ntBASIC3.93□□□□□ -1.78
SLC6A4P31645 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC6A4P31645 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A4P31645 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A4P31645 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A4P31645 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A4P31645 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC6A4P31645 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC6A4P31645 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC6A4P31645 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SLC6A4P31645 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC6A4P31645 PRO1804-201ENST00000623780 2050 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC6A4P31645 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC6A4P31645 RNU4-79P-201ENST00000362764 141 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 Y_RNA.414-201ENST00000384011 101 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 RNU6-1181P-201ENST00000384191 106 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 HMGB1P27-201ENST00000431429 603 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC6A4P31645 HMGB1P18-201ENST00000438801 619 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 PPP1R2P5-201ENST00000457256 603 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 AL133162.1-201ENST00000463228 453 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 HMGN1P13-201ENST00000505795 138 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.92□□□□□ -1.78
SLC6A4P31645 SNORA31.20-201ENST00000517111 133 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC6A4P31645 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC6A4P31645 AC109635.4-202ENST00000531666 412 ntBASIC3.92□□□□□ -1.78
SLC6A4P31645 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms