Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A5P29400 ACTR3BP3-201ENST00000565577 979 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AL355802.4-201ENST00000607635 548 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AP005137.2-201ENST00000609238 400 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AC083806.3-201ENST00000614016 455 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AC025588.4-201ENST00000615802 908 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
COL4A5P29400 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AC068880.5-201ENST00000624331 290 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A5P29400 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A5P29400 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A5P29400 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.61□□□□□ -2.15
COL4A5P29400 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A5P29400 DEFB108F-201ENST00000344638 222 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 RNU6-251P-201ENST00000363235 104 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 RNU6-193P-201ENST00000410977 107 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AC092447.6-201ENST00000414578 210 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A5P29400 HMGN2P38-201ENST00000423806 265 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A5P29400 MTND1P18-201ENST00000448191 573 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 DEFB108D-201ENST00000527787 222 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 AP000676.4-201ENST00000624659 623 ntBASIC1.61□□□□□ -2.15
COL4A5P29400 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A5P29400 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A5P29400 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
COL4A5P29400 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
COL4A5P29400 RNU6-989P-201ENST00000362756 107 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 RNU6-1032P-201ENST00000384100 107 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 RNU6-883P-201ENST00000384597 107 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 MIR627-201ENST00000384979 97 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 RNU2-25P-201ENST00000411041 191 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 AL355994.1-201ENST00000424379 260 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 AC012497.1-201ENST00000429392 575 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
COL4A5P29400 SNRPGP13-201ENST00000442212 177 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 HMGN2P18-201ENST00000450680 270 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 SNRPGP6-201ENST00000451124 220 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 RNU6-420P-201ENST00000458780 107 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 snoU13.28-201ENST00000459235 104 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 RPL23AP41-201ENST00000484754 458 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A5P29400 RNU6-1282P-201ENST00000516735 96 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 AC103833.1-201ENST00000517442 172 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.6□□□□□ -2.15
COL4A5P29400 MIR3921-201ENST00000577308 85 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 AC013553.2-201ENST00000604244 589 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 AL449363.1-201ENST00000617815 186 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 AC087359.1-201ENST00000508335 1740 ntBASIC1.6□□□□□ -2.15
COL4A5P29400 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A5P29400 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.6□□□□□ -2.15
COL4A5P29400 AP000560.1-201ENST00000624150 1937 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A5P29400 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A5P29400 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.59□□□□□ -2.15
COL4A5P29400 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
COL4A5P29400 RNU6-882P-201ENST00000391025 103 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 RNA5SP252-201ENST00000391131 119 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 BEND7P1-201ENST00000422058 457 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 UBE2V1P6-201ENST00000430840 422 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
COL4A5P29400 CALM1P1-201ENST00000442082 433 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A5P29400 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A5P29400 SEM1P1-201ENST00000506694 209 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 CBX3P3-201ENST00000508108 532 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 RNU6-1095P-201ENST00000516148 108 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 SNORA70.16-201ENST00000516390 95 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A5P29400 AP000907.2-201ENST00000530827 353 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.59□□□□□ -2.15
COL4A5P29400 SETP2-201ENST00000553886 926 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 FAM106DP-201ENST00000586416 501 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 HSPE1P7-201ENST00000604681 321 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 AL163051.2-201ENST00000618976 735 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 AL512506.2-201ENST00000624472 458 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 RBBP8P1-201ENST00000449447 1844 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 MTND5P11-201ENST00000511037 1812 ntBASIC1.59□□□□□ -2.15
COL4A5P29400 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
COL4A5P29400 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
COL4A5P29400 AC083799.1-201ENST00000366451 910 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 Y_RNA.393-201ENST00000383936 102 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 RNU4-52P-201ENST00000384209 138 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 MIR493-201ENST00000385254 89 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A5P29400 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A5P29400 RPL7L1P10-201ENST00000427790 463 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC011979.1-201ENST00000472300 483 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 RPL21P93-201ENST00000480465 489 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 OR52A4P-202ENST00000481634 799 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC233702.1-201ENST00000482905 502 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC093591.1-201ENST00000491435 481 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 ARL2BPP4-201ENST00000506854 471 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.58□□□□□ -2.16
COL4A5P29400 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.58□□□□□ -2.16
COL4A5P29400 ADAM3B-201ENST00000569937 840 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 TPTE2P4-201ENST00000258589 1605 ntBASIC1.58□□□□□ -2.16
COL4A5P29400 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms