Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RN7SKP123-201ENST00000410732 291 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 RPL26P27-201ENST00000414397 437 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AC104651.1-201ENST00000427559 735 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 MTND1P20-201ENST00000430341 950 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 HMGB1P27-201ENST00000431429 603 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AC097462.2-201ENST00000504623 481 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AC022447.1-201ENST00000515358 464 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 RNU5F-8P-201ENST00000515941 111 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AC138761.3-201ENST00000579993 334 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AC012119.1-201ENST00000603184 222 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 OR10AB1P-201ENST00000609613 938 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AC090970.3-201ENST00000612566 866 ntBASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DPA1P20036 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 Y_RNA.18-201ENST00000362461 102 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 U3.26-201ENST00000391236 204 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 RPL36AP53-201ENST00000432891 316 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC107083.1-201ENST00000439643 279 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 RPL23AP20-201ENST00000447965 421 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC003982.1-202ENST00000469928 248 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC034244.1-201ENST00000507687 207 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 MRPS36P5-201ENST00000551909 298 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC007151.1-201ENST00000572774 483 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 ZNF861P-201ENST00000588126 639 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AL356280.1-201ENST00000603614 379 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC135507.1-201ENST00000607214 561 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC107294.1-201ENST00000609524 467 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 DUSP12P1-201ENST00000612874 516 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 AC004520.1-201ENST00000608362 1413 ntBASIC2.82□□□□□ -1.96
HLA-DPA1P20036 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DPA1P20036 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 RNY4P24-201ENST00000362735 96 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AL021407.1-201ENST00000404531 386 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 NDUFS5P1-201ENST00000405668 289 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC078974.1-201ENST00000411597 223 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC025750.2-201ENST00000442609 450 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 FABP5P15-201ENST00000453566 214 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC098799.2-201ENST00000509466 868 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC091826.1-201ENST00000514065 313 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC024619.4-201ENST00000580924 316 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 MIR4307-201ENST00000582802 84 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 MIR3616-201ENST00000584070 92 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AF131215.7-201ENST00000602443 707 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC112187.2-201ENST00000604345 283 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DPA1P20036 MIR7106-201ENST00000612419 65 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 AC021755.4-201ENST00000616620 456 ntBASIC2.81□□□□□ -1.96
HLA-DPA1P20036 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 RNU6-1200P-201ENST00000384162 107 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 ZNF90P2-204ENST00000419323 1075 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 ISCA1P1-201ENST00000426679 387 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 TIMM9P1-201ENST00000436122 256 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC093156.1-201ENST00000440382 670 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC104389.3-201ENST00000445629 235 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 OR6C5P-201ENST00000452388 923 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC128713.1-201ENST00000471495 306 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms