| TFE3 | P19532 | ADNP-201 | ENST00000349014 | 5963 nt | APPRIS P1 TSL 1 (best) BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | DEPDC1-202 | ENST00000456315 | 5331 nt | TSL 1 (best) BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | CEP295-201 | ENST00000325212 | 8057 nt | APPRIS P2 TSL 2 BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RNU6-702P-201 | ENST00000364982 | 107 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | U3.15-201 | ENST00000365398 | 212 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | SCN1A-202 | ENST00000375405 | 8097 nt | APPRIS P3 TSL 5 BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | Y_RNA.389-201 | ENST00000383924 | 113 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RNU6-933P-201 | ENST00000384424 | 107 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RNU2-23P-201 | ENST00000410545 | 195 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC011933.1-201 | ENST00000413334 | 321 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | EI24P1-201 | ENST00000416584 | 867 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AL158156.1-201 | ENST00000422509 | 473 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC108059.2-201 | ENST00000434626 | 151 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | ATP6V0E1P2-201 | ENST00000441771 | 245 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC073587.1-201 | ENST00000447093 | 876 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RPS24P6-201 | ENST00000452670 | 400 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | snoU13.24-201 | ENST00000458998 | 104 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AP000942.1-201 | ENST00000463969 | 747 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RN7SL738P-201 | ENST00000470264 | 297 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC011005.2-201 | ENST00000487324 | 359 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC098587.1-201 | ENST00000508241 | 540 nt | TSL 4 BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | ACA59.1-201 | ENST00000515966 | 143 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | TRAV37-201 | ENST00000553906 | 342 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC110588.1-201 | ENST00000559699 | 137 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MIR4330-201 | ENST00000579077 | 105 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC113195.1-201 | ENST00000579952 | 141 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MIR3668-201 | ENST00000582138 | 75 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RN7SL52P-201 | ENST00000584271 | 284 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC006272.2-201 | ENST00000594725 | 163 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC234771.5-201 | ENST00000600161 | 514 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | BPIFA4P-203 | ENST00000603168 | 689 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AP000787.2-201 | ENST00000604432 | 568 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AP002826.1-201 | ENST00000608835 | 315 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RN7SL722P-201 | ENST00000617780 | 284 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RN7SL565P-201 | ENST00000618246 | 284 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MPP6-209 | ENST00000625307 | 126 nt | TSL 5 BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC119674.1-207 | ENST00000641355 | 633 nt | BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RGS5-201 | ENST00000313961 | 5862 nt | APPRIS P3 TSL 1 (best) BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | OR5A1-202 | ENST00000641045 | 8612 nt | APPRIS P1 BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | PLCH1-201 | ENST00000334686 | 6128 nt | APPRIS P3 TSL 1 (best) BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | KIF21A-201 | ENST00000361418 | 5044 nt | APPRIS P1 TSL 1 (best) BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | TPRG1-201 | ENST00000345063 | 5479 nt | APPRIS P1 TSL 1 (best) BASIC | 4.68 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MAPK10-235 | ENST00000638225 | 8941 nt | APPRIS P2 TSL 1 (best) BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | PATJ-202 | ENST00000316485 | 3657 nt | TSL 5 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RIMS1-204 | ENST00000401910 | 3542 nt | TSL 2 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RASA1-205 | ENST00000512763 | 3060 nt | APPRIS ALT2 TSL 2 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MAPK10-263 | ENST00000641052 | 4307 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | CSRNP3-201 | ENST00000314499 | 11788 nt | APPRIS P1 TSL 5 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | ZNF594-201 | ENST00000399604 | 4862 nt | APPRIS P1 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | ZMYND11-209 | ENST00000402736 | 3950 nt | TSL 5 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MAPK10-303 | ENST00000641324 | 3959 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MIR412-201 | ENST00000362142 | 91 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | SNORA56-201 | ENST00000383966 | 129 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MIR129-1-201 | ENST00000384972 | 72 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RNU6-101P-201 | ENST00000410323 | 104 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RPL37P18-201 | ENST00000411602 | 243 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AL136084.2-202 | ENST00000433997 | 353 nt | TSL 2 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RPS24P13-201 | ENST00000442520 | 397 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC012671.1-201 | ENST00000451912 | 203 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RPL9P32-201 | ENST00000464118 | 620 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RPS23P3-201 | ENST00000470993 | 430 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AL160314.1-201 | ENST00000490836 | 438 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC111194.2-201 | ENST00000511222 | 455 nt | TSL 5 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | LINC01256-201 | ENST00000513270 | 508 nt | TSL 2 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RNU6-120P-201 | ENST00000516077 | 103 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RN7SKP92-201 | ENST00000517266 | 244 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | UTP23-205 | ENST00000520733 | 369 nt | TSL 3 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MAL2-206 | ENST00000522187 | 547 nt | TSL 4 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC025871.1-201 | ENST00000523935 | 443 nt | TSL 2 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC055720.1-201 | ENST00000539552 | 475 nt | TSL 5 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC104002.1-201 | ENST00000557025 | 380 nt | TSL 3 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MED28P6-201 | ENST00000558776 | 231 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MIR4700-201 | ENST00000578311 | 74 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | VN1R107P-201 | ENST00000601784 | 209 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC104695.3-201 | ENST00000604052 | 296 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AL160290.3-201 | ENST00000604869 | 165 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AC010201.1-201 | ENST00000605051 | 540 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AL138825.1-201 | ENST00000618587 | 192 nt | BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AP003481.1-201 | ENST00000637808 | 351 nt | TSL 5 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | OR4C15-202 | ENST00000642128 | 951 nt | APPRIS P1 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | ZNF208-207 | ENST00000609966 | 3653 nt | TSL 5 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | SLC17A4-201 | ENST00000377905 | 3616 nt | APPRIS P1 TSL 1 (best) BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | NUTM2B-AS1-213 | ENST00000619625 | 7611 nt | TSL 2 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | CENPI-201 | ENST00000372926 | 2375 nt | APPRIS ALT2 TSL 5 BASIC | 4.67 | □□□□□ -1.66 | | |
| TFE3 | P19532 | AL136964.1-201 | ENST00000622038 | 2990 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | CDC27P3-201 | ENST00000635418 | 1910 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MPDZ-211 | ENST00000536827 | 6176 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | ZNF678-202 | ENST00000397097 | 8212 nt | APPRIS P1 TSL 1 (best) BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | BCAP29-203 | ENST00000379119 | 5773 nt | TSL 3 BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | Y_RNA.193-201 | ENST00000363979 | 102 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | MIR195-201 | ENST00000385194 | 87 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RNU6-174P-201 | ENST00000410406 | 106 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | RNU6-1025P-201 | ENST00000410629 | 104 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | TMSB10P2-201 | ENST00000416049 | 131 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | DPH3P2-201 | ENST00000422618 | 250 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | NDUFB4P7-201 | ENST00000423198 | 363 nt | BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | ZBTB40-IT1-201 | ENST00000438551 | 273 nt | TSL 3 BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | NRG3-AS1-201 | ENST00000448936 | 555 nt | TSL 2 BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | CREM-230 | ENST00000474931 | 626 nt | TSL 2 BASIC | 4.66 | □□□□□ -1.66 | | |
| TFE3 | P19532 | PLCXD2-AS1-201 | ENST00000493131 | 491 nt | TSL 3 BASIC | 4.66 | □□□□□ -1.66 | | |