Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 U6.114-201ENST00000636407 96 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DOBP13765 PRO1804-201ENST00000623780 2050 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DOBP13765 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DOBP13765 SNORA31-201ENST00000362607 130 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 RNU5A-1-201ENST00000362698 116 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 RNU6-701P-201ENST00000384059 107 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 SNORA24.1-201ENST00000384401 135 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DOBP13765 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 AL109913.1-201ENST00000421173 514 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 RPL7L1P10-201ENST00000427790 463 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 AC073063.1-201ENST00000434352 607 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 HSPD1P21-201ENST00000436541 245 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 AC073415.1-201ENST00000449240 153 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 MTND3P10-201ENST00000450967 341 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 RPS29P15-201ENST00000458329 171 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 AC092451.1-201ENST00000480211 153 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 RPL23AP55-201ENST00000498163 452 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 AC108043.1-201ENST00000512696 574 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 RNA5SP401-201ENST00000515920 127 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 RNA5SP309-201ENST00000516670 106 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 RNA5SP503-201ENST00000517047 117 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 RN7SKP258-201ENST00000517151 304 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 AC103843.2-201ENST00000530523 682 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 AL121579.1-201ENST00000555129 305 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DOBP13765 MIR3921-201ENST00000577308 85 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 BNIP3P30-201ENST00000601184 574 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 RNVU1-4-201ENST00000612985 164 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 AP003122.6-201ENST00000623831 495 ntBASIC3.09□□□□□ -1.91
HLA-DOBP13765 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DOBP13765 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.92
HLA-DOBP13765 CASC19-280ENST00000642102 1351 ntBASIC3.09□□□□□ -1.92
HLA-DOBP13765 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.09□□□□□ -1.92
HLA-DOBP13765 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 USP8P1-201ENST00000494673 3183 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AL139276.1-201ENST00000311910 1001 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 RNU6-867P-201ENST00000364956 107 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 RNU6-61P-201ENST00000365528 109 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 RNU6-946P-201ENST00000383878 107 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 RNU2-29P-201ENST00000410423 189 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 OR9R1P-201ENST00000412200 877 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC138393.2-201ENST00000414742 246 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC114491.1-201ENST00000416095 246 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 RPL30P16-201ENST00000419341 429 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 RPL21P66-201ENST00000426566 466 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC093106.2-201ENST00000428212 385 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 MTND1P18-201ENST00000448191 573 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 RPL7L1P8-201ENST00000469911 741 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 RPL38P4-201ENST00000502376 214 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC026784.1-201ENST00000507986 352 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC108078.2-201ENST00000510750 236 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 SNORA70.19-201ENST00000516717 90 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 NDUFB9P3-201ENST00000521269 501 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AF235103.2-201ENST00000525753 346 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AP006587.4-201ENST00000526053 529 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 HIF1AP1-201ENST00000553642 175 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 TGIF1P1-201ENST00000558095 802 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 MED28P6-201ENST00000558776 231 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC005951.2-201ENST00000576282 495 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 MIR4703-201ENST00000577728 79 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AP001330.4-201ENST00000604350 154 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 MIR6798-201ENST00000612887 67 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms