Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC139769.1-204ENST00000472297 1931 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 Y_RNA.152-201ENST00000363578 100 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 RNA5SP513-201ENST00000364648 118 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-1074P-201ENST00000383995 104 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-76P-201ENST00000384060 104 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 Y_RNA.424-201ENST00000384063 103 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 Y_RNA.515-201ENST00000384535 112 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AL356095.1-201ENST00000417217 199 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 RPS27AP13-201ENST00000498403 237 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC025465.3-201ENST00000510570 311 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-1023P-201ENST00000516137 106 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 RNA5SP49-201ENST00000516450 115 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 IGHV3-76-201ENST00000522465 295 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC022616.4-201ENST00000522985 181 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC106782.4-201ENST00000568264 210 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 MIR4286-201ENST00000580651 93 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 RN7SL600P-201ENST00000581811 299 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 SNORD84-203ENST00000584275 78 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 AC007619.2-201ENST00000605743 379 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 MIR6875-201ENST00000617506 72 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 MIR6891-201ENST00000618788 93 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 ADAM5-202ENST00000399789 1942 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 DDX18P3-201ENST00000404856 2007 ntBASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.87□□□□□ -1.47
CSB-PGBD3P0DP91 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-770P-201ENST00000363929 105 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-190P-201ENST00000384154 102 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-306P-201ENST00000384617 107 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC104333.2-201ENST00000422630 192 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC009901.1-201ENST00000506703 541 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-352P-201ENST00000516908 107 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 SNORA31.22-201ENST00000517204 135 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC090115.3-201ENST00000553218 849 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC067852.3-201ENST00000589177 561 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 BPIFA4P-203ENST00000603168 689 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC174048.1-201ENST00000603389 144 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 HMGB1P50-201ENST00000605814 607 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AL445363.3-201ENST00000623080 671 ntBASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.86□□□□□ -1.47
CSB-PGBD3P0DP91 LINC01109-201ENST00000603837 3081 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 Y_RNA.14-201ENST00000362415 103 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 SNORA20.1-201ENST00000364790 130 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 MIR1252-201ENST00000408861 65 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 RNA5SP111-201ENST00000411386 101 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 AC139712.2-201ENST00000424302 339 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 USMG5P1-201ENST00000425964 177 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 AC006946.1-201ENST00000429106 328 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 RN7SL691P-201ENST00000494487 301 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 AC022447.4-201ENST00000504053 364 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-1332P-201ENST00000516666 104 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 HSBP1P1-201ENST00000555205 166 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 MIR4660-201ENST00000583549 74 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 HMGB2P1-201ENST00000591146 634 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 AC011494.1-201ENST00000596454 237 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 AC104763.2-201ENST00000604179 382 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 AC010201.1-201ENST00000605051 540 ntBASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 MAPK10-349ENST00000641767 3661 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms