Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC010546.1-201ENST00000569391 485 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC138761.3-201ENST00000579993 334 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC008751.2-201ENST00000597885 980 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AP000403.1-201ENST00000603349 851 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC093424.1-201ENST00000604999 338 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AL356266.1-201ENST00000623311 483 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC092192.1-201ENST00000633154 1018 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 MTND5P7-201ENST00000413558 1798 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 ZNF519P1-201ENST00000449011 1626 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 SNORD62.1-201ENST00000362541 86 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 RNU6-1284P-201ENST00000363701 100 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 RPS20P2-201ENST00000402520 389 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 SNORA11.1-201ENST00000408133 129 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 RNU2-52P-201ENST00000410680 190 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 USP9YP13-201ENST00000417797 480 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC011233.1-201ENST00000422812 283 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AL593851.1-201ENST00000426171 157 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 ELOCP14-201ENST00000428070 331 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 SNRPEP9-201ENST00000436794 238 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 ELOCP7-201ENST00000439968 331 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 GDI2P2-201ENST00000445131 608 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 UBBP3-201ENST00000445497 241 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 RPS15AP27-201ENST00000449183 343 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 RPS29P20-201ENST00000489592 171 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC112673.1-201ENST00000513168 575 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 RNA5SP471-201ENST00000516971 106 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 RNU6-1003P-201ENST00000517099 105 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC022634.1-201ENST00000520765 532 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 SUB1P1-201ENST00000524415 382 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 MTCO3P13-201ENST00000577757 781 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC005498.1-201ENST00000592125 465 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 KC877982.1-201ENST00000602313 470 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC004805.2-201ENST00000605382 482 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 AC138915.1-201ENST00000565427 1685 ntBASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
IGHV3-43DP0DP04 PABPC1P9-201ENST00000426076 1612 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 MTND5P29-201ENST00000458676 1807 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 NDUFS5P1-201ENST00000405668 289 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 ELOCP17-201ENST00000414751 326 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 RPLP0P7-201ENST00000416050 667 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 COTL1P1-201ENST00000422309 375 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AL358075.3-201ENST00000426289 226 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 ARL5AP4-201ENST00000430731 512 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 MTND1P28-201ENST00000435623 950 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 RPL22P17-201ENST00000438729 315 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AC011816.1-201ENST00000441346 546 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 MTND5P2-201ENST00000442927 1142 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 COX6CP2-201ENST00000444980 225 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 RPL39P40-201ENST00000445481 146 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 CECR9-201ENST00000453421 199 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 SNORD109B-201ENST00000458961 67 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 SNORD109A-201ENST00000459128 67 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AC008571.1-201ENST00000467232 300 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 RPL31P41-201ENST00000477967 372 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 RPF2P2-201ENST00000504693 896 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 TBCAP3-201ENST00000512475 312 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 MRPS36P2-201ENST00000512569 299 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 MTND4LP18-201ENST00000526864 291 ntBASIC2.13□□□□□ -2.07
IGHV3-43DP0DP04 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms