Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC6P09630 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC6P09630 MTND4P12-201ENST00000498999 1377 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
HOXC6P09630 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HOXC6P09630 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HOXC6P09630 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HOXC6P09630 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC6P09630 RNA5SP258-201ENST00000362750 119 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 Y_RNA.160-201ENST00000363677 92 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 RNVU1-3-201ENST00000364313 161 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AP002088.1-201ENST00000382740 395 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 RNU6-877P-201ENST00000383868 107 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 SNORA70E-201ENST00000384492 135 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 SNORD15B-201ENST00000384714 146 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC6P09630 RNU2-8P-201ENST00000410727 190 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC6P09630 GTF2IP20-201ENST00000431663 360 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AC119618.1-201ENST00000434191 222 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 CST9LP2-201ENST00000437612 320 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 HMGB3P12-201ENST00000438745 556 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 RPL23AP20-201ENST00000447965 421 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC6P09630 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC6P09630 VN1R104P-201ENST00000505115 1009 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC6P09630 AC025465.4-201ENST00000513422 638 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC6P09630 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC6P09630 AC026801.2-201ENST00000515352 425 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 RNA5SP356-201ENST00000515972 94 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC6P09630 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC6P09630 AC022616.3-201ENST00000523940 148 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AP003497.1-201ENST00000528472 562 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 HIF1AP1-201ENST00000553642 175 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AC090615.1-201ENST00000577519 154 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC6P09630 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 LLPHP1-201ENST00000603571 367 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AL035413.2-201ENST00000604801 525 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 AL596245.1-201ENST00000618994 362 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC6P09630 AC073476.4-201ENST00000628409 72 ntBASIC3.56□□□□□ -1.84
HOXC6P09630 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HOXC6P09630 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC6P09630 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC6P09630 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC6P09630 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HOXC6P09630 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC6P09630 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC6P09630 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC6P09630 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC6P09630 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC6P09630 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC6P09630 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC6P09630 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
HOXC6P09630 RNU6-301P-201ENST00000384277 107 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 MIR153-1-201ENST00000384914 90 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AL138878.1-201ENST00000405131 347 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 RNU2-9P-201ENST00000410194 145 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 RNU6-55P-201ENST00000411092 107 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 RNU6-954P-201ENST00000411355 107 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC6P09630 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC6P09630 OR51AB1P-201ENST00000429046 620 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC6P09630 USP9YP7-201ENST00000436723 430 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC016696.1-201ENST00000446949 318 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC6P09630 TPT1P14-201ENST00000448018 505 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 FDX1P2-201ENST00000450769 375 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AL353691.1-201ENST00000451332 387 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 BX276092.4-201ENST00000452056 248 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 USP9YP32-201ENST00000452432 430 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC104308.1-201ENST00000454621 333 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC022364.2-201ENST00000457963 554 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 RPL9P32-201ENST00000464118 620 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC079382.1-201ENST00000493346 557 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC018710.1-201ENST00000506509 158 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC6P09630 AC046134.1-201ENST00000514454 666 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 RNU6-875P-201ENST00000516488 106 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC6P09630 AC104383.1-201ENST00000530297 370 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC6P09630 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC6P09630 MIR3146-201ENST00000580367 79 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC6P09630 AL034351.1-201ENST00000605288 668 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC6P09630 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC6P09630 MIR4496-201ENST00000635896 61 ntBASIC3.55□□□□□ -1.84
HOXC6P09630 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC6P09630 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC6P09630 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC6P09630 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms