Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MTCO3P38-201ENST00000468910 766 ntBASIC3.53□□□□□ -1.84
MMP3P08254 SNRPGP3-201ENST00000469405 227 ntBASIC3.53□□□□□ -1.84
MMP3P08254 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.53□□□□□ -1.84
MMP3P08254 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.53□□□□□ -1.84
MMP3P08254 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.53□□□□□ -1.84
MMP3P08254 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.53□□□□□ -1.84
MMP3P08254 AC123904.3-201ENST00000547218 814 ntBASIC3.53□□□□□ -1.84
MMP3P08254 MIR4293-201ENST00000584305 78 ntBASIC3.53□□□□□ -1.84
MMP3P08254 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.53□□□□□ -1.84
MMP3P08254 AC025449.1-201ENST00000603896 529 ntBASIC3.53□□□□□ -1.84
MMP3P08254 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
MMP3P08254 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
MMP3P08254 AL603758.1-201ENST00000618654 241 ntBASIC3.53□□□□□ -1.84
MMP3P08254 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.53□□□□□ -1.84
MMP3P08254 AC099506.2-201ENST00000623074 221 ntBASIC3.53□□□□□ -1.84
MMP3P08254 MIR3688-2-201ENST00000636963 87 ntBASIC3.53□□□□□ -1.84
MMP3P08254 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
MMP3P08254 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
MMP3P08254 AC138915.3-201ENST00000562908 1389 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AF127577.6-201ENST00000623352 2191 ntBASIC3.52□□□□□ -1.85
MMP3P08254 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
MMP3P08254 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
MMP3P08254 RNU6-511P-201ENST00000363496 107 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MMP3P08254 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.52□□□□□ -1.85
MMP3P08254 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AL109755.1-201ENST00000401791 649 ntBASIC3.52□□□□□ -1.85
MMP3P08254 RNU2-62P-201ENST00000410868 191 ntBASIC3.52□□□□□ -1.85
MMP3P08254 RPL21P24-201ENST00000413752 448 ntBASIC3.52□□□□□ -1.85
MMP3P08254 MTATP6P18-201ENST00000417994 673 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC099677.1-201ENST00000420575 175 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MMP3P08254 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.52□□□□□ -1.85
MMP3P08254 AC090774.1-201ENST00000435925 246 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.52□□□□□ -1.85
MMP3P08254 CST9LP2-201ENST00000437612 320 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC107083.1-201ENST00000439643 279 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC093156.1-201ENST00000440382 670 ntBASIC3.52□□□□□ -1.85
MMP3P08254 RBMX2P4-201ENST00000441256 376 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.52□□□□□ -1.85
MMP3P08254 AC027673.1-201ENST00000456245 405 ntBASIC3.52□□□□□ -1.85
MMP3P08254 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.52□□□□□ -1.85
MMP3P08254 AC021205.2-201ENST00000480069 347 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AL049830.2-201ENST00000480072 201 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC079382.1-201ENST00000493346 557 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.52□□□□□ -1.85
MMP3P08254 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.52□□□□□ -1.85
MMP3P08254 FAM60DP-201ENST00000524174 632 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AP004242.1-201ENST00000533701 349 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.52□□□□□ -1.85
MMP3P08254 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.52□□□□□ -1.85
MMP3P08254 HMGB1P33-201ENST00000563485 527 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.52□□□□□ -1.85
MMP3P08254 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.52□□□□□ -1.85
MMP3P08254 AC012507.3-201ENST00000603556 477 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AL121992.2-201ENST00000606262 256 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC004067.1-201ENST00000608733 700 ntBASIC3.52□□□□□ -1.85
MMP3P08254 MIR7106-201ENST00000612419 65 ntBASIC3.52□□□□□ -1.85
MMP3P08254 TUG1_2.1-201ENST00000614234 87 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AC004696.1-201ENST00000614345 607 ntBASIC3.52□□□□□ -1.85
MMP3P08254 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.52□□□□□ -1.85
MMP3P08254 MIR622-201ENST00000638396 96 ntBASIC3.52□□□□□ -1.85
MMP3P08254 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
MMP3P08254 CR848007.1-201ENST00000442354 1699 ntBASIC3.52□□□□□ -1.85
MMP3P08254 AP001148.1-201ENST00000624124 2359 ntBASIC3.52□□□□□ -1.85
MMP3P08254 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MMP3P08254 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MMP3P08254 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.52□□□□□ -1.85
MMP3P08254 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
MMP3P08254 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
MMP3P08254 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MMP3P08254 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
MMP3P08254 MIR423-201ENST00000362201 94 ntBASIC3.51□□□□□ -1.85
MMP3P08254 Y_RNA.9-201ENST00000362354 101 ntBASIC3.51□□□□□ -1.85
MMP3P08254 Y_RNA.22-201ENST00000362492 102 ntBASIC3.51□□□□□ -1.85
MMP3P08254 U3.11-201ENST00000364476 212 ntBASIC3.51□□□□□ -1.85
MMP3P08254 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.51□□□□□ -1.85
MMP3P08254 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.51□□□□□ -1.85
MMP3P08254 GPR143P-201ENST00000434155 205 ntBASIC3.51□□□□□ -1.85
MMP3P08254 RPL35AP22-201ENST00000436855 335 ntBASIC3.51□□□□□ -1.85
MMP3P08254 BNIP3P2-201ENST00000441221 577 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.51□□□□□ -1.85
MMP3P08254 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.51□□□□□ -1.85
MMP3P08254 AL162389.1-201ENST00000449233 177 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC008481.1-201ENST00000463278 396 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC093278.1-201ENST00000494700 600 ntBASIC3.51□□□□□ -1.85
MMP3P08254 FAM92A1P2-202ENST00000504766 877 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.51□□□□□ -1.85
MMP3P08254 HMGB1P22-201ENST00000505315 124 ntBASIC3.51□□□□□ -1.85
MMP3P08254 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC009812.2-201ENST00000517657 457 ntBASIC3.51□□□□□ -1.85
MMP3P08254 HMGB1P41-201ENST00000520234 440 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.51□□□□□ -1.85
MMP3P08254 AC134698.4-201ENST00000523451 826 ntBASIC3.51□□□□□ -1.85
MMP3P08254 OR5AQ1P-201ENST00000527596 927 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.51□□□□□ -1.85
MMP3P08254 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.51□□□□□ -1.85
MMP3P08254 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.51□□□□□ -1.85
MMP3P08254 AL512360.1-201ENST00000555346 234 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms