Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC010460.2-201ENST00000509054 677 ntBASIC2.02□□□□□ -2.09
TPM3P06753 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM3P06753 RNU6-528P-201ENST00000516926 100 ntBASIC2.02□□□□□ -2.09
TPM3P06753 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM3P06753 AC007151.1-201ENST00000572774 483 ntBASIC2.02□□□□□ -2.09
TPM3P06753 MIR4666A-201ENST00000580160 79 ntBASIC2.02□□□□□ -2.09
TPM3P06753 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM3P06753 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM3P06753 AC020658.4-201ENST00000613987 684 ntBASIC2.02□□□□□ -2.09
TPM3P06753 AC013476.2-201ENST00000614456 459 ntBASIC2.02□□□□□ -2.09
TPM3P06753 U4atac.1-201ENST00000618345 95 ntBASIC2.02□□□□□ -2.09
TPM3P06753 YWHAEP7-203ENST00000622054 312 ntBASIC2.02□□□□□ -2.09
TPM3P06753 AL159972.1-201ENST00000625150 448 ntBASIC2.02□□□□□ -2.09
TPM3P06753 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM3P06753 MIR4275-201ENST00000636486 87 ntBASIC2.02□□□□□ -2.09
TPM3P06753 ELF2P3-201ENST00000445099 1506 ntBASIC2.01□□□□□ -2.09
TPM3P06753 RNU6-481P-201ENST00000384194 107 ntBASIC2.01□□□□□ -2.09
TPM3P06753 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TPM3P06753 RNU6-932P-201ENST00000391108 106 ntBASIC2.01□□□□□ -2.09
TPM3P06753 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.01□□□□□ -2.09
TPM3P06753 PGBD4P6-201ENST00000421501 610 ntBASIC2.01□□□□□ -2.09
TPM3P06753 RPS3AP44-201ENST00000425466 790 ntBASIC2.01□□□□□ -2.09
TPM3P06753 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.01□□□□□ -2.09
TPM3P06753 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TPM3P06753 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.01□□□□□ -2.09
TPM3P06753 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.01□□□□□ -2.09
TPM3P06753 RPL7P18-201ENST00000478965 734 ntBASIC2.01□□□□□ -2.09
TPM3P06753 RPL9P6-201ENST00000492764 598 ntBASIC2.01□□□□□ -2.09
TPM3P06753 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.01□□□□□ -2.09
TPM3P06753 DEFB122-202ENST00000569013 197 ntBASIC2.01□□□□□ -2.09
TPM3P06753 AC105245.1-201ENST00000581934 244 ntBASIC2.01□□□□□ -2.09
TPM3P06753 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.01□□□□□ -2.09
TPM3P06753 RPP40P2-201ENST00000603596 712 ntBASIC2.01□□□□□ -2.09
TPM3P06753 SNRPGP19-201ENST00000603826 189 ntBASIC2.01□□□□□ -2.09
TPM3P06753 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.01□□□□□ -2.09
TPM3P06753 AL603758.1-201ENST00000618654 241 ntBASIC2.01□□□□□ -2.09
TPM3P06753 AL596245.1-201ENST00000618994 362 ntBASIC2.01□□□□□ -2.09
TPM3P06753 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.01□□□□□ -2.09
TPM3P06753 AP002791.1-201ENST00000623291 381 ntBASIC2.01□□□□□ -2.09
TPM3P06753 PISRT1-201ENST00000626175 531 ntBASIC2.01□□□□□ -2.09
TPM3P06753 AC116618.1-201ENST00000634617 774 ntBASIC2.01□□□□□ -2.09
TPM3P06753 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.01□□□□□ -2.09
TPM3P06753 RNU6-1066P-201ENST00000363573 105 ntBASIC2□□□□□ -2.09
TPM3P06753 SUGT1P1-201ENST00000379514 476 ntBASIC2□□□□□ -2.09
TPM3P06753 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
TPM3P06753 RNU6-549P-201ENST00000384433 107 ntBASIC2□□□□□ -2.09
TPM3P06753 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2□□□□□ -2.09
TPM3P06753 U6atac.2-201ENST00000408644 118 ntBASIC2□□□□□ -2.09
TPM3P06753 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TPM3P06753 RNU4-27P-201ENST00000410889 139 ntBASIC2□□□□□ -2.09
TPM3P06753 AL161449.1-201ENST00000414531 1199 ntBASIC2□□□□□ -2.09
TPM3P06753 TAF13P2-201ENST00000416876 286 ntBASIC2□□□□□ -2.09
TPM3P06753 MTATP6P27-201ENST00000416987 621 ntBASIC2□□□□□ -2.09
TPM3P06753 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2□□□□□ -2.09
TPM3P06753 IFNA20P-201ENST00000436840 528 ntBASIC2□□□□□ -2.09
TPM3P06753 AL691517.1-201ENST00000440833 1235 ntBASIC2□□□□□ -2.09
TPM3P06753 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2□□□□□ -2.09
TPM3P06753 RPL21P134-201ENST00000453468 483 ntBASIC2□□□□□ -2.09
TPM3P06753 AC026410.2-201ENST00000460281 156 ntBASIC2□□□□□ -2.09
TPM3P06753 AC107032.1-201ENST00000485945 480 ntBASIC2□□□□□ -2.09
TPM3P06753 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2□□□□□ -2.09
TPM3P06753 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2□□□□□ -2.09
TPM3P06753 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2□□□□□ -2.09
TPM3P06753 AC068276.1-201ENST00000605793 379 ntBASIC2□□□□□ -2.09
TPM3P06753 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2□□□□□ -2.09
TPM3P06753 AC104763.3-201ENST00000613765 618 ntBASIC2□□□□□ -2.09
TPM3P06753 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2□□□□□ -2.09
TPM3P06753 MTCO1P9-201ENST00000505577 1534 ntBASIC2□□□□□ -2.09
TPM3P06753 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TPM3P06753 RNU5E-8P-201ENST00000363502 116 ntBASIC1.99□□□□□ -2.09
TPM3P06753 RNU4-42P-201ENST00000364738 142 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AC019129.1-201ENST00000403786 261 ntBASIC1.99□□□□□ -2.09
TPM3P06753 SNORA11.1-201ENST00000408133 129 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.99□□□□□ -2.09
TPM3P06753 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.99□□□□□ -2.09
TPM3P06753 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.99□□□□□ -2.09
TPM3P06753 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.99□□□□□ -2.09
TPM3P06753 AC098831.1-201ENST00000440661 216 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AP001486.1-201ENST00000463339 476 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AC025181.1-201ENST00000477507 416 ntBASIC1.99□□□□□ -2.09
TPM3P06753 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.99□□□□□ -2.09
TPM3P06753 HMGB1P36-201ENST00000487709 576 ntBASIC1.99□□□□□ -2.09
TPM3P06753 CBX3P4-201ENST00000538909 354 ntBASIC1.99□□□□□ -2.09
TPM3P06753 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.99□□□□□ -2.09
TPM3P06753 LINC00933-203ENST00000559812 219 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AC005951.2-201ENST00000576282 495 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AC010928.2-201ENST00000588017 287 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AP002906.1-201ENST00000603405 233 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AC007038.2-201ENST00000608095 740 ntBASIC1.99□□□□□ -2.09
TPM3P06753 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.99□□□□□ -2.09
TPM3P06753 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.99□□□□□ -2.09
TPM3P06753 AC110491.1-201ENST00000562191 2010 ntBASIC1.98□□□□□ -2.09
TPM3P06753 ZNF702P-202ENST00000434269 1966 ntBASIC1.98□□□□□ -2.09
TPM3P06753 MTND5P30-201ENST00000452896 1731 ntBASIC1.98□□□□□ -2.09
TPM3P06753 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.98□□□□□ -2.09
TPM3P06753 RNU6-1159P-201ENST00000362933 107 ntBASIC1.98□□□□□ -2.09
TPM3P06753 RNA5SP425-201ENST00000410336 112 ntBASIC1.98□□□□□ -2.09
TPM3P06753 RNU2-2P-201ENST00000410396 191 ntBASIC1.98□□□□□ -2.09
TPM3P06753 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TPM3P06753 BX276092.3-201ENST00000424182 230 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms