Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPS20P10-201ENST00000451209 253 ntBASIC0.5□□□□□ -2.33
APOBP04114 AC008379.1-201ENST00000463655 464 ntBASIC0.5□□□□□ -2.33
APOBP04114 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.5□□□□□ -2.33
APOBP04114 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.5□□□□□ -2.33
APOBP04114 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
APOBP04114 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.5□□□□□ -2.33
APOBP04114 AL050343.2-201ENST00000607338 280 ntBASIC0.5□□□□□ -2.33
APOBP04114 AC005332.10-201ENST00000612725 619 ntBASIC0.5□□□□□ -2.33
APOBP04114 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.5□□□□□ -2.33
APOBP04114 AC123912.3-201ENST00000600907 1367 ntBASIC0.5□□□□□ -2.33
APOBP04114 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.5□□□□□ -2.33
APOBP04114 MIR147B-201ENST00000390185 80 ntBASIC0.5□□□□□ -2.33
APOBP04114 RPL23AP32-201ENST00000395315 459 ntBASIC0.5□□□□□ -2.33
APOBP04114 LINC01347-201ENST00000417964 355 ntBASIC0.5□□□□□ -2.33
APOBP04114 GTF2IP12-201ENST00000456547 356 ntBASIC0.5□□□□□ -2.33
APOBP04114 AL121769.1-201ENST00000469473 401 ntBASIC0.5□□□□□ -2.33
APOBP04114 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.5□□□□□ -2.33
APOBP04114 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.5□□□□□ -2.33
APOBP04114 AC024595.1-201ENST00000623088 387 ntBASIC0.5□□□□□ -2.33
APOBP04114 ELL2P3-201ENST00000457883 1602 ntBASIC0.5□□□□□ -2.33
APOBP04114 AC107032.1-201ENST00000485945 480 ntBASIC0.5□□□□□ -2.33
APOBP04114 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
APOBP04114 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.5□□□□□ -2.33
APOBP04114 RNU6-351P-201ENST00000516097 100 ntBASIC0.5□□□□□ -2.33
APOBP04114 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.5□□□□□ -2.33
APOBP04114 AC020658.4-201ENST00000613987 684 ntBASIC0.5□□□□□ -2.33
APOBP04114 RNU6-939P-201ENST00000384634 107 ntBASIC0.5□□□□□ -2.33
APOBP04114 SNORA46.1-201ENST00000391069 153 ntBASIC0.5□□□□□ -2.33
APOBP04114 HMGN2P30-201ENST00000423237 256 ntBASIC0.5□□□□□ -2.33
APOBP04114 AC068714.1-201ENST00000559623 800 ntBASIC0.5□□□□□ -2.33
APOBP04114 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.5□□□□□ -2.33
APOBP04114 AC007785.2-201ENST00000598627 1916 ntBASIC0.49□□□□□ -2.33
APOBP04114 ZNF90P2-204ENST00000419323 1075 ntBASIC0.49□□□□□ -2.33
APOBP04114 ELOCP6-201ENST00000429066 328 ntBASIC0.49□□□□□ -2.33
APOBP04114 HSFY3P-201ENST00000444242 1191 ntBASIC0.49□□□□□ -2.33
APOBP04114 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.49□□□□□ -2.33
APOBP04114 ELOCP12-201ENST00000458706 328 ntBASIC0.49□□□□□ -2.33
APOBP04114 AC087884.1-201ENST00000469738 328 ntBASIC0.49□□□□□ -2.33
APOBP04114 AC010683.1-201ENST00000473673 378 ntBASIC0.49□□□□□ -2.33
APOBP04114 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.49□□□□□ -2.33
APOBP04114 AC008083.4-201ENST00000615076 444 ntBASIC0.49□□□□□ -2.33
APOBP04114 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
APOBP04114 RNU6-1180P-201ENST00000364935 107 ntBASIC0.49□□□□□ -2.33
APOBP04114 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.49□□□□□ -2.33
APOBP04114 AC073464.3-201ENST00000422564 712 ntBASIC0.49□□□□□ -2.33
APOBP04114 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.49□□□□□ -2.33
APOBP04114 MIR409-201ENST00000362237 79 ntBASIC0.49□□□□□ -2.33
APOBP04114 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.49□□□□□ -2.33
APOBP04114 RNU6-16P-201ENST00000384385 107 ntBASIC0.49□□□□□ -2.33
APOBP04114 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.49□□□□□ -2.33
APOBP04114 AP001960.1-201ENST00000506494 658 ntBASIC0.49□□□□□ -2.33
APOBP04114 NDUFS5P6-201ENST00000529136 295 ntBASIC0.49□□□□□ -2.33
APOBP04114 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.49□□□□□ -2.33
APOBP04114 AC093510.2-201ENST00000562820 896 ntBASIC0.49□□□□□ -2.33
APOBP04114 AC107214.2-201ENST00000608204 634 ntBASIC0.49□□□□□ -2.33
APOBP04114 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
APOBP04114 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
APOBP04114 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.48□□□□□ -2.33
APOBP04114 MTATP6P4-201ENST00000427725 675 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.48□□□□□ -2.33
APOBP04114 AL591043.1-201ENST00000432461 424 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.48□□□□□ -2.33
APOBP04114 AC004022.1-201ENST00000447766 1066 ntBASIC0.48□□□□□ -2.33
APOBP04114 RNA5SP310-201ENST00000459084 116 ntBASIC0.48□□□□□ -2.33
APOBP04114 SNORA31.20-201ENST00000517111 133 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC104997.1-201ENST00000519761 717 ntBASIC0.48□□□□□ -2.33
APOBP04114 AL133507.1-201ENST00000605269 557 ntBASIC0.48□□□□□ -2.33
APOBP04114 ZNF33CP-201ENST00000432492 2030 ntBASIC0.48□□□□□ -2.33
APOBP04114 RNU6-1235P-201ENST00000384559 107 ntBASIC0.48□□□□□ -2.33
APOBP04114 U8.14-201ENST00000390843 143 ntBASIC0.48□□□□□ -2.33
APOBP04114 MTND2P9-201ENST00000422293 931 ntBASIC0.48□□□□□ -2.33
APOBP04114 AL031663.1-201ENST00000437445 219 ntBASIC0.48□□□□□ -2.33
APOBP04114 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.48□□□□□ -2.33
APOBP04114 AC069277.2-201ENST00000454211 432 ntBASIC0.48□□□□□ -2.33
APOBP04114 RNU6-498P-201ENST00000459468 107 ntBASIC0.48□□□□□ -2.33
APOBP04114 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
APOBP04114 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.48□□□□□ -2.33
APOBP04114 AC067942.3-201ENST00000512025 362 ntBASIC0.48□□□□□ -2.33
APOBP04114 RN7SKP179-201ENST00000516126 217 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.48□□□□□ -2.33
APOBP04114 AC009220.3-201ENST00000604318 586 ntBASIC0.48□□□□□ -2.33
APOBP04114 AL355472.4-201ENST00000610233 626 ntBASIC0.48□□□□□ -2.33
APOBP04114 uc_338.9-201ENST00000617424 182 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC080100.1-201ENST00000624239 5356 ntBASIC0.48□□□□□ -2.33
APOBP04114 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.48□□□□□ -2.33
APOBP04114 RNU6-942P-201ENST00000363002 107 ntBASIC0.48□□□□□ -2.33
APOBP04114 RNU4-31P-201ENST00000384211 141 ntBASIC0.48□□□□□ -2.33
APOBP04114 RNU6-225P-201ENST00000384613 103 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC244453.4-201ENST00000419150 388 ntBASIC0.48□□□□□ -2.33
APOBP04114 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.48□□□□□ -2.33
APOBP04114 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.48□□□□□ -2.33
APOBP04114 AC246680.2-201ENST00000422106 389 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC146507.1-201ENST00000468335 354 ntBASIC0.48□□□□□ -2.33
APOBP04114 PCNAP1-201ENST00000505363 709 ntBASIC0.48□□□□□ -2.33
APOBP04114 RNU1-61P-201ENST00000516107 151 ntBASIC0.48□□□□□ -2.33
APOBP04114 SUB1P1-201ENST00000524415 382 ntBASIC0.48□□□□□ -2.33
APOBP04114 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.48□□□□□ -2.33
APOBP04114 SNORA38-201ENST00000363946 132 ntBASIC0.48□□□□□ -2.33
APOBP04114 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.48□□□□□ -2.33
APOBP04114 MTND2P2-201ENST00000434633 945 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms