Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MT-ND4P03905 AL359511.1-201ENST00000402970 211 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.01□□□□□ -2.09
MT-ND4P03905 RNA5SP184-201ENST00000411071 108 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.01□□□□□ -2.09
MT-ND4P03905 RPL35AP22-201ENST00000436855 335 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.01□□□□□ -2.09
MT-ND4P03905 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.01□□□□□ -2.09
MT-ND4P03905 MTND3P3-201ENST00000505004 126 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.01□□□□□ -2.09
MT-ND4P03905 AC114786.4-201ENST00000508771 728 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 AC114797.1-201ENST00000514003 728 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 HMGN1P28-201ENST00000521340 364 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.01□□□□□ -2.09
MT-ND4P03905 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 EIF4BP1-201ENST00000554881 351 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.01□□□□□ -2.09
MT-ND4P03905 MIR4319-201ENST00000577285 85 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 AC060771.1-201ENST00000582031 164 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 AF038458.1-201ENST00000588406 262 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.01□□□□□ -2.09
MT-ND4P03905 AL596327.1-201ENST00000603629 213 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 AL355877.2-201ENST00000603670 358 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 SNORD14A-201ENST00000606526 91 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
MT-ND4P03905 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MT-ND4P03905 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.01□□□□□ -2.09
MT-ND4P03905 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MT-ND4P03905 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
MT-ND4P03905 RNU4-92P-201ENST00000363783 136 ntBASIC2□□□□□ -2.09
MT-ND4P03905 RNA5SP68-201ENST00000363885 119 ntBASIC2□□□□□ -2.09
MT-ND4P03905 RNU6-884P-201ENST00000363889 107 ntBASIC2□□□□□ -2.09
MT-ND4P03905 RN7SKP226-201ENST00000364912 300 ntBASIC2□□□□□ -2.09
MT-ND4P03905 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2□□□□□ -2.09
MT-ND4P03905 MIR518C-201ENST00000384822 101 ntBASIC2□□□□□ -2.09
MT-ND4P03905 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND4P03905 MTCO1P17-201ENST00000411522 491 ntBASIC2□□□□□ -2.09
MT-ND4P03905 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2□□□□□ -2.09
MT-ND4P03905 MTND1P23-201ENST00000416931 372 ntBASIC2□□□□□ -2.09
MT-ND4P03905 NUP35P1-201ENST00000422734 947 ntBASIC2□□□□□ -2.09
MT-ND4P03905 AC092648.1-201ENST00000425870 423 ntBASIC2□□□□□ -2.09
MT-ND4P03905 TXNL1P1-201ENST00000429528 554 ntBASIC2□□□□□ -2.09
MT-ND4P03905 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2□□□□□ -2.09
MT-ND4P03905 FCF1P1-201ENST00000432690 571 ntBASIC2□□□□□ -2.09
MT-ND4P03905 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2□□□□□ -2.09
MT-ND4P03905 AC108938.1-201ENST00000451204 136 ntBASIC2□□□□□ -2.09
MT-ND4P03905 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2□□□□□ -2.09
MT-ND4P03905 RPL36AP51-201ENST00000487216 318 ntBASIC2□□□□□ -2.09
MT-ND4P03905 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND4P03905 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2□□□□□ -2.09
MT-ND4P03905 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND4P03905 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND4P03905 RNA5SP356-201ENST00000515972 94 ntBASIC2□□□□□ -2.09
MT-ND4P03905 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND4P03905 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND4P03905 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND4P03905 AC025281.1-201ENST00000567026 265 ntBASIC2□□□□□ -2.09
MT-ND4P03905 ABBA01006766.1-201ENST00000584728 294 ntBASIC2□□□□□ -2.09
MT-ND4P03905 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2□□□□□ -2.09
MT-ND4P03905 AC010608.3-201ENST00000625048 527 ntBASIC2□□□□□ -2.09
MT-ND4P03905 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
MT-ND4P03905 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
MT-ND4P03905 ZNF658B-202ENST00000615961 3375 ntBASIC2□□□□□ -2.09
MT-ND4P03905 CCT4P2-201ENST00000233836 1548 ntBASIC2□□□□□ -2.09
MT-ND4P03905 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
MT-ND4P03905 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MT-ND4P03905 AC016717.2-201ENST00000609089 5141 ntBASIC2□□□□□ -2.09
MT-ND4P03905 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MT-ND4P03905 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MT-ND4P03905 SNORA3A-201ENST00000364113 130 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 SNORA11.1-201ENST00000408133 129 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 MIR320C1-201ENST00000408566 88 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC023141.4-201ENST00000412031 328 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.99□□□□□ -2.09
MT-ND4P03905 NANOGP5-201ENST00000424456 877 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MT-ND4P03905 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 RSU1P2-202ENST00000437884 485 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.99□□□□□ -2.09
MT-ND4P03905 MTCO3P45-201ENST00000443036 613 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 MTATP6P30-201ENST00000443540 664 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.99□□□□□ -2.09
MT-ND4P03905 PTENP1-201ENST00000447117 1215 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AL109933.2-201ENST00000452651 260 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MT-ND4P03905 MTND2P39-201ENST00000457230 764 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 USP9YP25-201ENST00000457708 443 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 RPL7P18-201ENST00000478965 734 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 RN7SL432P-201ENST00000484057 298 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.99□□□□□ -2.09
MT-ND4P03905 AC096576.1-201ENST00000489014 359 ntBASIC1.99□□□□□ -2.09
MT-ND4P03905 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms