Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.3□□□□□ -2.2
TNFP01375 AP000275.1-201ENST00000411943 390 ntBASIC1.3□□□□□ -2.2
TNFP01375 VN1R36P-201ENST00000414936 291 ntBASIC1.3□□□□□ -2.2
TNFP01375 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.3□□□□□ -2.2
TNFP01375 AC096920.1-201ENST00000423991 241 ntBASIC1.3□□□□□ -2.2
TNFP01375 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.3□□□□□ -2.2
TNFP01375 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.3□□□□□ -2.2
TNFP01375 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TNFP01375 AC016691.1-201ENST00000441321 413 ntBASIC1.3□□□□□ -2.2
TNFP01375 AL360221.1-201ENST00000445989 335 ntBASIC1.3□□□□□ -2.2
TNFP01375 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.3□□□□□ -2.2
TNFP01375 AC022880.1-201ENST00000534017 973 ntBASIC1.3□□□□□ -2.2
TNFP01375 LINC00933-203ENST00000559812 219 ntBASIC1.3□□□□□ -2.2
TNFP01375 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.3□□□□□ -2.2
TNFP01375 AC012443.1-201ENST00000605605 231 ntBASIC1.3□□□□□ -2.2
TNFP01375 AC007038.2-201ENST00000608095 740 ntBASIC1.3□□□□□ -2.2
TNFP01375 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.3□□□□□ -2.2
TNFP01375 RNA5SP125-201ENST00000364843 120 ntBASIC1.29□□□□□ -2.2
TNFP01375 RNU6-1035P-201ENST00000384477 107 ntBASIC1.29□□□□□ -2.2
TNFP01375 AL590084.1-201ENST00000407885 387 ntBASIC1.29□□□□□ -2.2
TNFP01375 RNA5SP247-201ENST00000411181 105 ntBASIC1.29□□□□□ -2.2
TNFP01375 AC092745.2-202ENST00000411880 369 ntBASIC1.29□□□□□ -2.2
TNFP01375 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.29□□□□□ -2.2
TNFP01375 AL109913.1-201ENST00000421173 514 ntBASIC1.29□□□□□ -2.2
TNFP01375 RPS3AP44-201ENST00000425466 790 ntBASIC1.29□□□□□ -2.2
TNFP01375 RPS6P15-201ENST00000431996 751 ntBASIC1.29□□□□□ -2.2
TNFP01375 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.29□□□□□ -2.2
TNFP01375 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.29□□□□□ -2.2
TNFP01375 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
TNFP01375 AP003033.1-201ENST00000527244 415 ntBASIC1.29□□□□□ -2.2
TNFP01375 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.29□□□□□ -2.2
TNFP01375 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.29□□□□□ -2.2
TNFP01375 AC024619.4-201ENST00000580924 316 ntBASIC1.29□□□□□ -2.2
TNFP01375 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.29□□□□□ -2.2
TNFP01375 AC079791.1-201ENST00000605356 973 ntBASIC1.29□□□□□ -2.2
TNFP01375 AC110792.4-201ENST00000609843 298 ntBASIC1.29□□□□□ -2.2
TNFP01375 AC073592.7-201ENST00000623659 507 ntBASIC1.29□□□□□ -2.2
TNFP01375 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TNFP01375 RNU6-19P-201ENST00000384718 107 ntBASIC1.28□□□□□ -2.2
TNFP01375 CISD1P1-201ENST00000393907 327 ntBASIC1.28□□□□□ -2.2
TNFP01375 AC068050.1-201ENST00000394891 380 ntBASIC1.28□□□□□ -2.2
TNFP01375 OR9R1P-201ENST00000412200 877 ntBASIC1.28□□□□□ -2.2
TNFP01375 DNAJC19P4-201ENST00000440115 345 ntBASIC1.28□□□□□ -2.2
TNFP01375 AC004865.1-201ENST00000442276 1003 ntBASIC1.28□□□□□ -2.2
TNFP01375 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.28□□□□□ -2.2
TNFP01375 AC087884.1-201ENST00000469738 328 ntBASIC1.28□□□□□ -2.2
TNFP01375 SNORD116-30-201ENST00000516468 85 ntBASIC1.28□□□□□ -2.2
TNFP01375 RNU6-798P-201ENST00000516912 103 ntBASIC1.28□□□□□ -2.2
TNFP01375 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.28□□□□□ -2.2
TNFP01375 CBX3P7-201ENST00000532876 502 ntBASIC1.28□□□□□ -2.2
TNFP01375 MTCYBP23-201ENST00000558717 1102 ntBASIC1.28□□□□□ -2.2
TNFP01375 AL354943.1-201ENST00000572103 781 ntBASIC1.28□□□□□ -2.2
TNFP01375 MIR3199-1-201ENST00000582434 88 ntBASIC1.28□□□□□ -2.2
TNFP01375 AC003001.2-201ENST00000616294 831 ntBASIC1.28□□□□□ -2.2
TNFP01375 AC109454.4-201ENST00000623411 649 ntBASIC1.28□□□□□ -2.2
TNFP01375 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
TNFP01375 AC025048.6-202ENST00000627667 438 ntBASIC1.28□□□□□ -2.2
TNFP01375 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TNFP01375 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TNFP01375 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
TNFP01375 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TNFP01375 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
TNFP01375 AC099548.1-201ENST00000421443 426 ntBASIC1.27□□□□□ -2.21
TNFP01375 RPL23AP16-201ENST00000441715 421 ntBASIC1.27□□□□□ -2.21
TNFP01375 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.27□□□□□ -2.21
TNFP01375 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.27□□□□□ -2.21
TNFP01375 AL137159.1-201ENST00000452808 512 ntBASIC1.27□□□□□ -2.21
TNFP01375 TOMM22P6-201ENST00000465035 409 ntBASIC1.27□□□□□ -2.21
TNFP01375 AL049714.1-201ENST00000466686 347 ntBASIC1.27□□□□□ -2.21
TNFP01375 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.27□□□□□ -2.21
TNFP01375 HMGN1P7-201ENST00000491722 313 ntBASIC1.27□□□□□ -2.21
TNFP01375 SUMO2P6-201ENST00000505273 288 ntBASIC1.27□□□□□ -2.21
TNFP01375 RNU5F-8P-201ENST00000515941 111 ntBASIC1.27□□□□□ -2.21
TNFP01375 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.27□□□□□ -2.21
TNFP01375 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.27□□□□□ -2.21
TNFP01375 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.27□□□□□ -2.21
TNFP01375 AC084364.2-201ENST00000546924 395 ntBASIC1.27□□□□□ -2.21
TNFP01375 MTCYBP27-201ENST00000555160 670 ntBASIC1.27□□□□□ -2.21
TNFP01375 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.27□□□□□ -2.21
TNFP01375 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.27□□□□□ -2.21
TNFP01375 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.27□□□□□ -2.21
TNFP01375 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.27□□□□□ -2.21
TNFP01375 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
TNFP01375 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.27□□□□□ -2.21
TNFP01375 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.27□□□□□ -2.21
TNFP01375 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.27□□□□□ -2.21
TNFP01375 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TNFP01375 CDC27P3-201ENST00000635418 1910 ntBASIC1.27□□□□□ -2.21
TNFP01375 MIR126-201ENST00000362291 85 ntBASIC1.26□□□□□ -2.21
TNFP01375 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.26□□□□□ -2.21
TNFP01375 VN1R108P-201ENST00000431580 830 ntBASIC1.26□□□□□ -2.21
TNFP01375 GTF2IP7-202ENST00000436677 309 ntBASIC1.26□□□□□ -2.21
TNFP01375 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.26□□□□□ -2.21
TNFP01375 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.26□□□□□ -2.21
TNFP01375 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.26□□□□□ -2.21
TNFP01375 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.26□□□□□ -2.21
TNFP01375 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.26□□□□□ -2.21
TNFP01375 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.26□□□□□ -2.21
TNFP01375 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
TNFP01375 AC098848.2-201ENST00000588023 330 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms