Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL136981.2-201ENST00000617319 734 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 AL445264.1-201ENST00000621719 171 ntBASIC2.34□□□□□ -2.03
CTDNEP1O95476 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.34□□□□□ -2.03
CTDNEP1O95476 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTDNEP1O95476 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
CTDNEP1O95476 MAPK10-266ENST00000641066 6555 ntBASIC2.34□□□□□ -2.04
CTDNEP1O95476 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
CTDNEP1O95476 AC093536.2-201ENST00000565257 1406 ntBASIC2.34□□□□□ -2.04
CTDNEP1O95476 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CTDNEP1O95476 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CTDNEP1O95476 RNU6-1214P-201ENST00000363650 109 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 SNORA51.11-201ENST00000384442 131 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 Y_RNA.500-201ENST00000384466 111 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AL079342.1-201ENST00000401460 267 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 MTCO2P21-201ENST00000419780 677 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC002381.1-201ENST00000447049 280 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 MTND1P31-201ENST00000449206 961 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC105185.1-201ENST00000518705 535 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC023050.2-201ENST00000544968 387 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC091544.4-201ENST00000555268 342 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC011260.1-201ENST00000578420 472 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AL391001.1-201ENST00000602747 715 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC004853.1-201ENST00000604902 698 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AL592221.1-201ENST00000605266 382 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC080013.4-201ENST00000607624 649 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AL355816.2-201ENST00000610049 647 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AL596245.1-201ENST00000618994 362 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC027309.3-201ENST00000623419 351 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC068880.5-201ENST00000624331 290 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 MIR219B-201ENST00000637023 88 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CTDNEP1O95476 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 AC008669.1-201ENST00000565823 2178 ntBASIC2.33□□□□□ -2.04
CTDNEP1O95476 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
CTDNEP1O95476 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CTDNEP1O95476 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 RNU6-433P-201ENST00000363216 104 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 RNU6-1155P-201ENST00000363554 107 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 SNORA4.1-201ENST00000364263 144 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 MIR135A2-201ENST00000384854 100 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 MTATP6P27-201ENST00000416987 621 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC234781.2-201ENST00000426370 994 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 MTND4P6-201ENST00000438297 472 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 ARPC3P5-201ENST00000448802 534 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 MEMO1P3-201ENST00000459811 302 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CTDNEP1O95476 RPL23AP70-201ENST00000483361 460 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 RN7SKP287-201ENST00000516546 266 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 RNU1-104P-201ENST00000517280 175 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 OR4R1P-201ENST00000529879 463 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL158211.1-201ENST00000566763 763 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL354943.1-201ENST00000572103 781 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 OR4K8P-201ENST00000578842 1048 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL022099.1-201ENST00000604551 712 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC093424.1-201ENST00000604999 338 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL136363.1-201ENST00000605349 337 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL121917.1-203ENST00000605534 577 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL161629.2-201ENST00000615347 275 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL450472.3-201ENST00000615578 367 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AL356585.4-201ENST00000623078 1229 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AP002791.1-201ENST00000623291 381 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC010149.2-201ENST00000637608 315 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC010680.1-201ENST00000590024 3590 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 AC005539.1-201ENST00000443768 1479 ntBASIC2.32□□□□□ -2.04
CTDNEP1O95476 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CTDNEP1O95476 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
CTDNEP1O95476 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CTDNEP1O95476 RNU6-931P-201ENST00000363850 107 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms