Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCAF4O95104 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCAF4O95104 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCAF4O95104 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SCAF4O95104 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SCAF4O95104 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCAF4O95104 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCAF4O95104 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SCAF4O95104 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.78□□□□□ -1.8
SCAF4O95104 RNA5SP123-201ENST00000363244 119 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6-288P-201ENST00000363690 104 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6-335P-201ENST00000364563 113 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6-505P-201ENST00000384427 107 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6-45P-201ENST00000384471 107 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 Y_RNA.527-201ENST00000384573 102 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6-882P-201ENST00000391025 103 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6-817P-201ENST00000391083 104 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AL590704.1-201ENST00000402856 794 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RPL7AP73-201ENST00000413490 353 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.78□□□□□ -1.8
SCAF4O95104 RPL21P91-201ENST00000429231 479 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AC236972.1-201ENST00000433225 199 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AL353748.1-201ENST00000440753 474 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AL359672.1-201ENST00000442302 409 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 NOTCH2P1-201ENST00000443481 624 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 GSTA11P-201ENST00000452866 669 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.78□□□□□ -1.8
SCAF4O95104 SNORD5.1-201ENST00000458800 75 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RN7SL329P-201ENST00000467740 299 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RN7SL826P-201ENST00000479724 288 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 IGLV2-34-201ENST00000490007 283 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AC026801.1-201ENST00000497178 464 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AC140172.1-201ENST00000502928 141 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6-470P-201ENST00000515954 104 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6-120P-201ENST00000516077 103 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 RNU1-54P-201ENST00000517181 120 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCAF4O95104 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.78□□□□□ -1.8
SCAF4O95104 AC004817.2-201ENST00000561794 651 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.78□□□□□ -1.8
SCAF4O95104 BNIP3P16-201ENST00000589779 534 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.78□□□□□ -1.8
SCAF4O95104 7SK.7-201ENST00000603504 247 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 HMGN2P28-201ENST00000606102 262 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.78□□□□□ -1.8
SCAF4O95104 PISRT1.1-201ENST00000616930 107 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AL162373.1-201ENST00000620433 407 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AC068870.2-201ENST00000620635 389 ntBASIC3.78□□□□□ -1.8
SCAF4O95104 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.78□□□□□ -1.8
SCAF4O95104 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCAF4O95104 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.78□□□□□ -1.81
SCAF4O95104 AF127577.6-201ENST00000623352 2191 ntBASIC3.78□□□□□ -1.81
SCAF4O95104 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SCAF4O95104 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SCAF4O95104 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.77□□□□□ -1.81
SCAF4O95104 AP001148.1-201ENST00000624124 2359 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCAF4O95104 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SCAF4O95104 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCAF4O95104 AC138393.1-203ENST00000327086 343 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 SNORD62.1-201ENST00000362541 86 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 Y_RNA.364-201ENST00000365532 101 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 RNU6-76P-201ENST00000384060 104 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 SNORA51.8-201ENST00000384234 132 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 RNU1-44P-201ENST00000384453 163 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 RNU6-306P-201ENST00000384617 107 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 Y_RNA.557-201ENST00000384680 107 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SCAF4O95104 Z98745.1-201ENST00000402553 494 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AL357515.1-201ENST00000402967 542 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 RPL37P18-201ENST00000411602 243 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAF4O95104 AC114482.1-201ENST00000418010 247 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AF186996.5-201ENST00000418098 904 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.77□□□□□ -1.81
SCAF4O95104 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.77□□□□□ -1.81
SCAF4O95104 AC243428.1-201ENST00000421099 264 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 USP9YP30-201ENST00000430729 455 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AL591212.2-201ENST00000433923 257 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.77□□□□□ -1.81
SCAF4O95104 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.77□□□□□ -1.81
SCAF4O95104 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAF4O95104 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAF4O95104 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAF4O95104 RPL12P3-201ENST00000440080 396 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.77□□□□□ -1.81
SCAF4O95104 AC008264.1-201ENST00000447612 367 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 FTH1P2-201ENST00000466086 412 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAF4O95104 MRPS33P2-201ENST00000507850 322 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AC092436.3-201ENST00000511788 257 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 RNA5SP384-201ENST00000516615 116 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 RNU6-699P-201ENST00000517081 110 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.77□□□□□ -1.81
SCAF4O95104 ERHP1-201ENST00000523006 310 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AC026371.1-201ENST00000551867 419 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AL049839.1-201ENST00000556151 657 ntBASIC3.77□□□□□ -1.81
SCAF4O95104 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms