Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC146944.4-201ENST00000602697 718 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AC022893.3-201ENST00000607665 437 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AC012409.4-201ENST00000612923 249 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AL359880.1-201ENST00000621879 266 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AC034229.5-201ENST00000624258 185 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX2-2O95096 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-2O95096 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-2O95096 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-2O95096 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-2O95096 HSPA8P1-201ENST00000425843 1833 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 API5P2-201ENST00000397055 1498 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 ZNF680P1-201ENST00000436625 1469 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NKX2-2O95096 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
NKX2-2O95096 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-2O95096 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.16□□□□□ -1.9
NKX2-2O95096 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NKX2-2O95096 RNU4-35P-201ENST00000362588 141 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 RNU6-140P-201ENST00000384566 108 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 MIR184-201ENST00000384962 84 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 MIR218-2-201ENST00000385006 110 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 MIR591-201ENST00000385290 95 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 PTMAP5-201ENST00000393073 333 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 Z98941.1-201ENST00000407764 100 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 RNU6-55P-201ENST00000411092 107 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 RNU6-954P-201ENST00000411355 107 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 Z99755.1-201ENST00000414048 380 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC080125.1-201ENST00000414888 684 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.16□□□□□ -1.9
NKX2-2O95096 OR51A5P-201ENST00000415429 942 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC092809.3-201ENST00000415453 231 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-2O95096 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.16□□□□□ -1.9
NKX2-2O95096 AL451062.2-201ENST00000427515 271 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 RPL23AP82-202ENST00000427528 469 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 TIMM9P3-201ENST00000428659 274 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC091286.1-201ENST00000431233 461 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.16□□□□□ -1.9
NKX2-2O95096 DDX3P2-201ENST00000446138 111 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AL356010.1-201ENST00000456364 102 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-2O95096 CENPBD1P1-201ENST00000464061 469 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC025518.1-201ENST00000479856 347 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-2O95096 AC098591.2-201ENST00000510152 315 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 Y_RNA.689-201ENST00000516589 107 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-2O95096 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-2O95096 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.16□□□□□ -1.9
NKX2-2O95096 AC016957.1-201ENST00000534895 309 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.16□□□□□ -1.9
NKX2-2O95096 AC080078.2-201ENST00000603766 501 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 RMST_8.1-201ENST00000610287 165 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 FTX_3.1-201ENST00000610451 147 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC013562.2-201ENST00000611632 603 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AC130324.3-201ENST00000614165 542 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 AL359547.2-201ENST00000615810 418 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 U7.8-201ENST00000619968 63 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-2O95096 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX2-2O95096 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX2-2O95096 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX2-2O95096 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
NKX2-2O95096 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NKX2-2O95096 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-2O95096 MAPK10-322ENST00000641485 4530 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX2-2O95096 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-2O95096 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-2O95096 AC007256.1-201ENST00000392253 2765 ntBASIC3.16□□□□□ -1.9
NKX2-2O95096 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-2O95096 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NKX2-2O95096 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
NKX2-2O95096 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NKX2-2O95096 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-2O95096 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-2O95096 AC005183.1-201ENST00000603687 1979 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 FTLP6-201ENST00000355274 422 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 SNORD115-7-201ENST00000365306 82 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 Y_RNA.516-201ENST00000384541 124 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NKX2-2O95096 PTMAP2-201ENST00000397627 327 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 AC126124.2-201ENST00000413542 321 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 RPS29P4-201ENST00000414733 161 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 AL353193.1-201ENST00000421444 268 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-2O95096 DPPA2P1-201ENST00000428060 556 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 GPM6BP2-201ENST00000432046 144 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 AL591704.1-201ENST00000432574 275 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 GPM6BP1-201ENST00000446387 144 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 RPL23AP20-201ENST00000447965 421 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-2O95096 RNU7-182P-201ENST00000459009 62 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 AL672167.3-201ENST00000465951 960 ntBASIC3.15□□□□□ -1.91
NKX2-2O95096 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms