Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC098657.3-201ENST00000620434 263 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 AL031601.2-202ENST00000622650 282 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PRPF40AO75400 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF40AO75400 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF40AO75400 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF40AO75400 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF40AO75400 MFSD8-216ENST00000641147 4009 ntBASIC5.03□□□□□ -1.6
PRPF40AO75400 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40AO75400 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40AO75400 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40AO75400 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PRPF40AO75400 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF40AO75400 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PRPF40AO75400 AC138393.1-203ENST00000327086 343 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 SNORD3E-201ENST00000362899 217 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 RNU6-95P-201ENST00000384697 107 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 RNA5SP397-201ENST00000391323 118 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
PRPF40AO75400 Y_RNA.646-201ENST00000410980 101 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40AO75400 ATP5HP2-201ENST00000433885 485 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 HMGN2P21-201ENST00000447764 270 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 AL162591.2-201ENST00000449634 317 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 HMGB3P30-201ENST00000457863 606 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 AC084198.1-201ENST00000477747 402 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF40AO75400 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 SUMO2P6-201ENST00000505273 288 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.02□□□□□ -1.61
PRPF40AO75400 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF40AO75400 RNU6-1256P-201ENST00000516539 103 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 RNU6-1073P-201ENST00000517182 106 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.02□□□□□ -1.61
PRPF40AO75400 ATP5F1P5-201ENST00000526403 760 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF40AO75400 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF40AO75400 AC100830.2-201ENST00000581636 240 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 uc_338.22-201ENST00000622722 187 ntBASIC5.02□□□□□ -1.61
PRPF40AO75400 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF40AO75400 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PRPF40AO75400 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40AO75400 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
PRPF40AO75400 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40AO75400 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PRPF40AO75400 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
PRPF40AO75400 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 RNU6-639P-201ENST00000384074 107 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 RNU6-1179P-201ENST00000384667 107 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 RNA5SP332-201ENST00000391063 115 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 AC016397.1-201ENST00000412463 242 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40AO75400 AC091390.3-201ENST00000426478 338 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 DNAJC19P7-201ENST00000428811 344 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF40AO75400 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40AO75400 AC009220.1-201ENST00000451614 275 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF40AO75400 RPS26P15-201ENST00000488067 348 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 HMGB1P30-201ENST00000492455 606 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 SMURF2P1-201ENST00000514992 481 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 Vault.1-201ENST00000516474 102 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 RN7SKP92-201ENST00000517266 244 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 RNU6-988P-201ENST00000519081 107 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 RAB9BP1-201ENST00000519581 626 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF40AO75400 AL352979.3-201ENST00000553515 247 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 AL161798.1-201ENST00000604630 131 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 AC116312.1-201ENST00000606841 314 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 AC008785.1-201ENST00000624475 456 ntBASIC5.01□□□□□ -1.61
PRPF40AO75400 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF40AO75400 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PRPF40AO75400 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PRPF40AO75400 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40AO75400 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF40AO75400 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF40AO75400 SNORD62.1-201ENST00000362541 86 ntBASIC5□□□□□ -1.61
PRPF40AO75400 SNORA7.2-201ENST00000364446 145 ntBASIC5□□□□□ -1.61
PRPF40AO75400 SNORA63C-201ENST00000364578 129 ntBASIC5□□□□□ -1.61
PRPF40AO75400 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5□□□□□ -1.61
PRPF40AO75400 SNORA75B-201ENST00000384053 137 ntBASIC5□□□□□ -1.61
PRPF40AO75400 SNORA70F-201ENST00000384142 135 ntBASIC5□□□□□ -1.61
PRPF40AO75400 RNU6-328P-201ENST00000390887 106 ntBASIC5□□□□□ -1.61
PRPF40AO75400 RNU6-308P-201ENST00000390957 107 ntBASIC5□□□□□ -1.61
PRPF40AO75400 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5□□□□□ -1.61
PRPF40AO75400 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5□□□□□ -1.61
PRPF40AO75400 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5□□□□□ -1.61
PRPF40AO75400 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF40AO75400 AC068287.1-201ENST00000430283 295 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms