Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC092573.2-201ENST00000434546 243 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 AC092393.1-201ENST00000439625 742 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.35□□□□□ -2.03
NPHP4O75161 AC005297.2-201ENST00000450430 606 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 AC244505.3-201ENST00000454598 187 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.35□□□□□ -2.03
NPHP4O75161 AC069528.1-202ENST00000482888 637 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 RNA5SP220-201ENST00000516298 104 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.35□□□□□ -2.03
NPHP4O75161 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NPHP4O75161 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NPHP4O75161 OR10V3P-201ENST00000525712 725 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 AC023825.1-201ENST00000566704 1030 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.35□□□□□ -2.03
NPHP4O75161 AL078603.1-201ENST00000603824 313 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 AL445435.1-201ENST00000604232 665 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 NUTF2P8-201ENST00000604593 363 ntBASIC2.35□□□□□ -2.03
NPHP4O75161 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
NPHP4O75161 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NPHP4O75161 UBE2L2-201ENST00000254302 429 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 HMGB1P5-201ENST00000255320 642 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 SNRPEP2-201ENST00000397592 279 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.34□□□□□ -2.03
NPHP4O75161 TMEM167AP1-201ENST00000423409 219 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AC092634.2-201ENST00000428146 1010 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AC024082.2-201ENST00000434771 238 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 RPS15AP36-201ENST00000492022 382 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AC010460.2-201ENST00000509054 677 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 RNU5A-7P-201ENST00000515979 116 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 CASP1P1-201ENST00000526345 212 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.34□□□□□ -2.03
NPHP4O75161 CR383656.7-201ENST00000548164 174 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AL161670.1-201ENST00000554348 137 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 MTCYBP27-201ENST00000555160 670 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AC138915.2-201ENST00000569776 97 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 GLUD1P4-201ENST00000590914 418 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AC022709.1-201ENST00000615967 87 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AC007275.1-201ENST00000621243 671 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.34□□□□□ -2.03
NPHP4O75161 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
NPHP4O75161 DBF4P1-201ENST00000412976 1892 ntBASIC2.34□□□□□ -2.03
NPHP4O75161 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.34□□□□□ -2.03
NPHP4O75161 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NPHP4O75161 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NPHP4O75161 ZNF876P-202ENST00000398732 1485 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NPHP4O75161 RNU6-1180P-201ENST00000364935 107 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 TAS2R15P-201ENST00000390674 928 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
NPHP4O75161 MIR1323-201ENST00000408090 73 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NPHP4O75161 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 LSM1P1-201ENST00000438629 273 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 UBBP3-201ENST00000445497 241 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 RPS4XP11-201ENST00000446897 772 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 DPPA3P1-201ENST00000448050 469 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.34□□□□□ -2.04
NPHP4O75161 AC023424.2-201ENST00000493479 777 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 BOLA3P3-201ENST00000505182 232 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 COX7A2P2-201ENST00000505291 250 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.34□□□□□ -2.04
NPHP4O75161 AC008628.1-201ENST00000508663 265 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 AC010625.1-201ENST00000511296 403 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.34□□□□□ -2.04
NPHP4O75161 MTND2P31-201ENST00000512602 616 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.34□□□□□ -2.04
NPHP4O75161 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.34□□□□□ -2.04
NPHP4O75161 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.34□□□□□ -2.04
NPHP4O75161 NBEAP1-201ENST00000554452 979 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.34□□□□□ -2.04
NPHP4O75161 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.34□□□□□ -2.04
NPHP4O75161 SEPT7P9-203ENST00000604116 343 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 AL031176.1-201ENST00000604554 466 ntBASIC2.34□□□□□ -2.04
NPHP4O75161 OR4G11P-202ENST00000642116 1414 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.33□□□□□ -2.04
NPHP4O75161 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
NPHP4O75161 AC090740.1-201ENST00000623193 2262 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.33□□□□□ -2.04
NPHP4O75161 Y_RNA.110-201ENST00000363220 99 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 SUGT1P1-201ENST00000379514 476 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 RNU6-878P-201ENST00000384578 110 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 SNORA1.3-201ENST00000384676 136 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.33□□□□□ -2.04
NPHP4O75161 SEPT7P5-201ENST00000434048 306 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.33□□□□□ -2.04
NPHP4O75161 AC010099.1-201ENST00000455434 375 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 RPS15AP17-201ENST00000470598 390 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 AC108734.3-201ENST00000481241 1165 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.33□□□□□ -2.04
NPHP4O75161 RPL21P131-201ENST00000497298 483 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 AC135721.1-201ENST00000497954 479 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 AC147055.4-201ENST00000504399 745 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 SETP7-201ENST00000552169 453 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 AL133507.1-201ENST00000605269 557 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NPHP4O75161 MIR6734-201ENST00000621166 68 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 AC068880.4-201ENST00000623082 495 ntBASIC2.33□□□□□ -2.04
NPHP4O75161 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.33□□□□□ -2.04
NPHP4O75161 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms