Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RNF40O75150 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RNF40O75150 RNU6-879P-201ENST00000364328 108 ntBASIC5.83□□□□□ -1.48
RNF40O75150 RNA5SP267-201ENST00000364893 126 ntBASIC5.83□□□□□ -1.48
RNF40O75150 RNU6-741P-201ENST00000383889 107 ntBASIC5.83□□□□□ -1.48
RNF40O75150 RNU6-211P-201ENST00000384047 107 ntBASIC5.83□□□□□ -1.48
RNF40O75150 RNU6-76P-201ENST00000384060 104 ntBASIC5.83□□□□□ -1.48
RNF40O75150 RNY4P18-201ENST00000391107 89 ntBASIC5.83□□□□□ -1.48
RNF40O75150 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF40O75150 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF40O75150 POLR2KP2-201ENST00000438155 177 ntBASIC5.83□□□□□ -1.48
RNF40O75150 AC073465.2-201ENST00000440938 498 ntBASIC5.83□□□□□ -1.48
RNF40O75150 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF40O75150 AC009296.1-201ENST00000443146 155 ntBASIC5.83□□□□□ -1.48
RNF40O75150 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF40O75150 AC108043.1-201ENST00000512696 574 ntBASIC5.83□□□□□ -1.48
RNF40O75150 AC122688.1-201ENST00000541494 223 ntBASIC5.83□□□□□ -1.48
RNF40O75150 MRPS21P7-201ENST00000566937 238 ntBASIC5.83□□□□□ -1.48
RNF40O75150 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF40O75150 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF40O75150 AL670379.2-201ENST00000604983 252 ntBASIC5.83□□□□□ -1.48
RNF40O75150 Y_RNA.802-201ENST00000614892 130 ntBASIC5.83□□□□□ -1.48
RNF40O75150 MIR7155-201ENST00000615925 56 ntBASIC5.83□□□□□ -1.48
RNF40O75150 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.83□□□□□ -1.48
RNF40O75150 AC073869.8-201ENST00000641806 335 ntBASIC5.83□□□□□ -1.48
RNF40O75150 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF40O75150 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RNF40O75150 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF40O75150 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
RNF40O75150 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF40O75150 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF40O75150 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RNF40O75150 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF40O75150 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF40O75150 Y_RNA.121-201ENST00000363309 113 ntBASIC5.82□□□□□ -1.48
RNF40O75150 SNORD115-32-201ENST00000364079 82 ntBASIC5.82□□□□□ -1.48
RNF40O75150 Y_RNA.230-201ENST00000364348 109 ntBASIC5.82□□□□□ -1.48
RNF40O75150 Y_RNA.357-201ENST00000365487 109 ntBASIC5.82□□□□□ -1.48
RNF40O75150 RNU6-898P-201ENST00000365627 104 ntBASIC5.82□□□□□ -1.48
RNF40O75150 SNORA36C-201ENST00000384289 132 ntBASIC5.82□□□□□ -1.48
RNF40O75150 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF40O75150 AL022722.2-201ENST00000402519 180 ntBASIC5.82□□□□□ -1.48
RNF40O75150 RNU6-1025P-201ENST00000410629 104 ntBASIC5.82□□□□□ -1.48
RNF40O75150 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF40O75150 RPS27P18-201ENST00000431701 247 ntBASIC5.82□□□□□ -1.48
RNF40O75150 RPS5P7-201ENST00000456664 608 ntBASIC5.82□□□□□ -1.48
RNF40O75150 RN7SL51P-201ENST00000468230 285 ntBASIC5.82□□□□□ -1.48
RNF40O75150 RN7SL826P-201ENST00000479724 288 ntBASIC5.82□□□□□ -1.48
RNF40O75150 RPS4XP1-201ENST00000482189 787 ntBASIC5.82□□□□□ -1.48
RNF40O75150 RN7SL570P-201ENST00000484405 292 ntBASIC5.82□□□□□ -1.48
RNF40O75150 RNU6-1114P-201ENST00000516022 107 ntBASIC5.82□□□□□ -1.48
RNF40O75150 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RNF40O75150 AC040958.1-201ENST00000561102 201 ntBASIC5.82□□□□□ -1.48
RNF40O75150 AC096996.1-201ENST00000563813 325 ntBASIC5.82□□□□□ -1.48
RNF40O75150 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF40O75150 MIR4700-201ENST00000578311 74 ntBASIC5.82□□□□□ -1.48
RNF40O75150 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.82□□□□□ -1.48
RNF40O75150 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF40O75150 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.82□□□□□ -1.48
RNF40O75150 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.82□□□□□ -1.48
RNF40O75150 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF40O75150 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF40O75150 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF40O75150 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RNF40O75150 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF40O75150 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF40O75150 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF40O75150 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF40O75150 AC110774.1-201ENST00000623567 2018 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF40O75150 RNU6-1175P-201ENST00000365200 107 ntBASIC5.81□□□□□ -1.48
RNF40O75150 RNU1-74P-201ENST00000384108 171 ntBASIC5.81□□□□□ -1.48
RNF40O75150 RNU6-80P-201ENST00000384195 107 ntBASIC5.81□□□□□ -1.48
RNF40O75150 RNU6-843P-201ENST00000384454 104 ntBASIC5.81□□□□□ -1.48
RNF40O75150 Y_RNA.563-201ENST00000384707 108 ntBASIC5.81□□□□□ -1.48
RNF40O75150 RNU6-239P-201ENST00000390990 99 ntBASIC5.81□□□□□ -1.48
RNF40O75150 RNU2-2P-201ENST00000410396 191 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AL158156.1-201ENST00000422509 473 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AL139148.1-201ENST00000427122 680 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AC108161.1-201ENST00000461060 402 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AP000870.1-201ENST00000472927 406 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AC104164.2-201ENST00000496953 495 ntBASIC5.81□□□□□ -1.48
RNF40O75150 RN7SKP49-201ENST00000516675 260 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF40O75150 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF40O75150 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.81□□□□□ -1.48
RNF40O75150 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF40O75150 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF40O75150 RNU2-4P-201ENST00000606190 192 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AC107294.1-201ENST00000609524 467 ntBASIC5.81□□□□□ -1.48
RNF40O75150 AL008718.3-201ENST00000610217 321 ntBASIC5.81□□□□□ -1.48
RNF40O75150 U2.15-201ENST00000611544 191 ntBASIC5.81□□□□□ -1.48
RNF40O75150 U2.16-201ENST00000613119 191 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms