Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTCD1O75127 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 Y_RNA.2-201ENST00000362330 96 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 RNU6-774P-201ENST00000363238 107 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 Y_RNA.117-201ENST00000363294 101 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 RNU6-770P-201ENST00000363929 105 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 RNU6-266P-201ENST00000364225 107 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 RNU6-1303P-201ENST00000364841 107 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 RNU6-33P-201ENST00000384793 107 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 MIR23A-201ENST00000385245 73 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 Z99755.1-201ENST00000414048 380 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 AC108032.1-201ENST00000416706 207 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 RPL36AP10-201ENST00000421785 322 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 RPL23AP50-201ENST00000434149 455 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCD1O75127 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.5□□□□□ -1.53
PTCD1O75127 RPL37P6-201ENST00000460682 294 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 AC008571.1-201ENST00000467232 300 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 AP000926.1-201ENST00000479573 241 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCD1O75127 RNA5SP73-201ENST00000516744 108 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 RN7SKP258-201ENST00000517151 304 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCD1O75127 AC002044.1-201ENST00000606707 158 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 MIR8069-1-201ENST00000616627 86 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 MIR8069-2-201ENST00000621412 86 ntBASIC5.5□□□□□ -1.53
PTCD1O75127 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCD1O75127 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.5□□□□□ -1.53
PTCD1O75127 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCD1O75127 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCD1O75127 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCD1O75127 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCD1O75127 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCD1O75127 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PTCD1O75127 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PTCD1O75127 AC138393.1-203ENST00000327086 343 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 RNU1-20P-201ENST00000363314 162 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCD1O75127 RNU6-882P-201ENST00000391025 103 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 RNU6-817P-201ENST00000391083 104 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 RNU6-293P-201ENST00000411259 106 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 AL356968.1-201ENST00000416622 474 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 BX842559.1-201ENST00000419615 532 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 USMG5P1-201ENST00000425964 177 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 USP9YP30-201ENST00000430729 455 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 RPL23AP25-201ENST00000430973 463 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCD1O75127 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCD1O75127 AC008264.1-201ENST00000447612 367 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 RPL23AP81-201ENST00000455252 467 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 AC084198.1-201ENST00000477747 402 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 AC022493.2-201ENST00000506122 481 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 RNA5SP143-201ENST00000516936 115 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.49□□□□□ -1.53
PTCD1O75127 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCD1O75127 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PTCD1O75127 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCD1O75127 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCD1O75127 AL161423.1-201ENST00000613700 262 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 AC099669.2-201ENST00000616549 437 ntBASIC5.49□□□□□ -1.53
PTCD1O75127 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCD1O75127 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCD1O75127 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PTCD1O75127 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCD1O75127 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
PTCD1O75127 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
PTCD1O75127 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PTCD1O75127 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTCD1O75127 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCD1O75127 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PTCD1O75127 Y_RNA.60-201ENST00000362831 98 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 RNU6-490P-201ENST00000362985 107 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCD1O75127 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCD1O75127 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.48□□□□□ -1.53
PTCD1O75127 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCD1O75127 HMGN2P27-201ENST00000427352 270 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCD1O75127 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCD1O75127 PTMAP3-201ENST00000447474 330 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCD1O75127 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.48□□□□□ -1.53
PTCD1O75127 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.48□□□□□ -1.53
PTCD1O75127 RNU6-120P-201ENST00000516077 103 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 SCARNA16.2-201ENST00000516520 172 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 AC090151.1-201ENST00000520784 730 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.48□□□□□ -1.53
PTCD1O75127 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCD1O75127 RPL23AP87-202ENST00000573039 466 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 MIR15A-201ENST00000607334 83 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms