Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 AC004801.2-202ENST00000463559 283 ntBASIC3.85□□□□□ -1.79
PROM1O43490 RN7SL432P-201ENST00000484057 298 ntBASIC3.85□□□□□ -1.79
PROM1O43490 RNA5SP143-201ENST00000516936 115 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AP005597.4-201ENST00000526762 229 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.85□□□□□ -1.79
PROM1O43490 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.85□□□□□ -1.79
PROM1O43490 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
PROM1O43490 MTCO3P13-201ENST00000577757 781 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.85□□□□□ -1.79
PROM1O43490 MIR5684-201ENST00000585074 65 ntBASIC3.85□□□□□ -1.79
PROM1O43490 MIR4424-201ENST00000585257 86 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AF038458.1-201ENST00000588406 262 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AC012669.1-201ENST00000603209 283 ntBASIC3.85□□□□□ -1.79
PROM1O43490 CTHRC1P1-201ENST00000605383 469 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AL133215.3-201ENST00000609801 448 ntBASIC3.85□□□□□ -1.79
PROM1O43490 uc_338.15-201ENST00000615470 191 ntBASIC3.85□□□□□ -1.79
PROM1O43490 SNHG22-203ENST00000617833 660 ntBASIC3.85□□□□□ -1.79
PROM1O43490 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PROM1O43490 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.85□□□□□ -1.79
PROM1O43490 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PROM1O43490 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.84□□□□□ -1.79
PROM1O43490 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PROM1O43490 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PROM1O43490 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PROM1O43490 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.84□□□□□ -1.79
PROM1O43490 MIR372-201ENST00000362225 67 ntBASIC3.84□□□□□ -1.79
PROM1O43490 RNU6-1249P-201ENST00000363237 111 ntBASIC3.84□□□□□ -1.79
PROM1O43490 Y_RNA.138-201ENST00000363462 102 ntBASIC3.84□□□□□ -1.79
PROM1O43490 SNORD35B-201ENST00000363660 87 ntBASIC3.84□□□□□ -1.79
PROM1O43490 RNU6-960P-201ENST00000364056 120 ntBASIC3.84□□□□□ -1.79
PROM1O43490 Y_RNA.259-201ENST00000364619 101 ntBASIC3.84□□□□□ -1.79
PROM1O43490 SNORA70.4-201ENST00000365509 134 ntBASIC3.84□□□□□ -1.79
PROM1O43490 RNA5SP283-201ENST00000365604 119 ntBASIC3.84□□□□□ -1.79
PROM1O43490 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PROM1O43490 Y_RNA.414-201ENST00000384011 101 ntBASIC3.84□□□□□ -1.79
PROM1O43490 RNU6-1013P-201ENST00000384180 107 ntBASIC3.84□□□□□ -1.79
PROM1O43490 Y_RNA.530-201ENST00000384587 101 ntBASIC3.84□□□□□ -1.79
PROM1O43490 RNA5SP44-201ENST00000410446 133 ntBASIC3.84□□□□□ -1.79
PROM1O43490 HSPE1P12-201ENST00000412576 301 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.84□□□□□ -1.79
PROM1O43490 AL353729.1-201ENST00000425044 720 ntBASIC3.84□□□□□ -1.79
PROM1O43490 RPL21P66-201ENST00000426566 466 ntBASIC3.84□□□□□ -1.79
PROM1O43490 MTND4P19-201ENST00000446659 478 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AL162389.1-201ENST00000449233 177 ntBASIC3.84□□□□□ -1.79
PROM1O43490 FABP5P13-201ENST00000452144 328 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.84□□□□□ -1.79
PROM1O43490 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.84□□□□□ -1.79
PROM1O43490 RNU1-45P-201ENST00000517191 141 ntBASIC3.84□□□□□ -1.79
PROM1O43490 IGKV2D-19-201ENST00000523346 262 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.84□□□□□ -1.79
PROM1O43490 AC022432.1-201ENST00000595739 310 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AL670379.6-201ENST00000603753 252 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AL670379.11-201ENST00000604059 253 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AC008162.1-201ENST00000604718 254 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AL670379.1-201ENST00000604752 252 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AL670379.5-201ENST00000605253 252 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AL670379.12-201ENST00000605291 253 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AL670379.8-201ENST00000605353 252 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AL670379.7-201ENST00000605823 252 ntBASIC3.84□□□□□ -1.79
PROM1O43490 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
PROM1O43490 AC112484.5-201ENST00000624189 228 ntBASIC3.84□□□□□ -1.79
PROM1O43490 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.84□□□□□ -1.79
PROM1O43490 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PROM1O43490 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PROM1O43490 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.84□□□□□ -1.79
PROM1O43490 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.84□□□□□ -1.8
PROM1O43490 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.83□□□□□ -1.8
PROM1O43490 AC004925.1-201ENST00000624256 2706 ntBASIC3.83□□□□□ -1.8
PROM1O43490 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PROM1O43490 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PROM1O43490 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PROM1O43490 RNU6-1252P-201ENST00000363054 104 ntBASIC3.83□□□□□ -1.8
PROM1O43490 Y_RNA.326-201ENST00000365176 113 ntBASIC3.83□□□□□ -1.8
PROM1O43490 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PROM1O43490 SOD2P1-201ENST00000396543 562 ntBASIC3.83□□□□□ -1.8
PROM1O43490 AL592114.1-201ENST00000403842 483 ntBASIC3.83□□□□□ -1.8
PROM1O43490 RPL30P2-201ENST00000414021 291 ntBASIC3.83□□□□□ -1.8
PROM1O43490 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.83□□□□□ -1.8
PROM1O43490 TOMM22P1-201ENST00000418578 312 ntBASIC3.83□□□□□ -1.8
PROM1O43490 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.83□□□□□ -1.8
PROM1O43490 AC099677.1-201ENST00000420575 175 ntBASIC3.83□□□□□ -1.8
PROM1O43490 RPL7P46-201ENST00000425129 740 ntBASIC3.83□□□□□ -1.8
PROM1O43490 MTCO3P45-201ENST00000443036 613 ntBASIC3.83□□□□□ -1.8
PROM1O43490 snoU13.24-201ENST00000458998 104 ntBASIC3.83□□□□□ -1.8
PROM1O43490 RNU6-1208P-201ENST00000459588 107 ntBASIC3.83□□□□□ -1.8
PROM1O43490 RPL21P8-201ENST00000465083 535 ntBASIC3.83□□□□□ -1.8
PROM1O43490 AC010631.1-201ENST00000474150 156 ntBASIC3.83□□□□□ -1.8
PROM1O43490 VN1R105P-201ENST00000486595 910 ntBASIC3.83□□□□□ -1.8
PROM1O43490 AL132838.2-201ENST00000492041 314 ntBASIC3.83□□□□□ -1.8
PROM1O43490 RPL7P23-201ENST00000493874 747 ntBASIC3.83□□□□□ -1.8
PROM1O43490 AC106872.2-201ENST00000494303 480 ntBASIC3.83□□□□□ -1.8
PROM1O43490 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.83□□□□□ -1.8
PROM1O43490 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.83□□□□□ -1.8
PROM1O43490 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.83□□□□□ -1.8
PROM1O43490 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms