Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF3O43395 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF3O43395 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF3O43395 RNU6-188P-201ENST00000364207 107 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 Y_RNA.245-201ENST00000364493 95 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 PTMAP2-201ENST00000397627 327 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AL590002.1-201ENST00000406554 418 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 RNU2-29P-201ENST00000410423 189 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AC009237.5-201ENST00000414271 501 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF3O43395 UBE2D3P2-201ENST00000424409 445 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 GOT2P5-201ENST00000433995 546 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 UBE2V1P8-201ENST00000437166 265 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 HMGN2P20-201ENST00000437531 273 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF3O43395 VN1R34P-201ENST00000447387 883 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF3O43395 AC083798.1-201ENST00000472671 131 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 RPL36AP51-201ENST00000487216 318 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 RPS15AP34-201ENST00000487776 387 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF3O43395 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF3O43395 APOOP4-201ENST00000513530 597 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AC022690.1-201ENST00000526681 550 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AC104383.1-201ENST00000530297 370 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 BNIP3P9-201ENST00000603714 553 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AC007619.2-201ENST00000605743 379 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AC022149.2-201ENST00000621061 203 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AC027309.3-201ENST00000623419 351 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 AC093648.1-201ENST00000623546 606 ntBASIC4.07□□□□□ -1.76
PRPF3O43395 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF3O43395 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF3O43395 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF3O43395 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF3O43395 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF3O43395 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF3O43395 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF3O43395 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF3O43395 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PRPF3O43395 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF3O43395 RPL7P26-201ENST00000333817 754 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 RNU6-61P-201ENST00000365528 109 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF3O43395 SNORA24.1-201ENST00000384401 135 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 RNU6-14P-201ENST00000384630 106 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 MIR301A-201ENST00000385261 86 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF3O43395 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF3O43395 RPS12P24-201ENST00000412619 387 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 AC068533.1-201ENST00000418542 415 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF3O43395 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF3O43395 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF3O43395 AC091390.3-201ENST00000426478 338 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF3O43395 HSPD1P21-201ENST00000436541 245 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 SETP5-201ENST00000437270 562 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 HMGB3P11-201ENST00000440127 604 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 MTND4P25-201ENST00000441039 533 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF3O43395 Z99127.3-201ENST00000448158 395 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 RBMY2UP-201ENST00000453474 324 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 HMGB3P15-201ENST00000507326 574 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 SNORA67.7-201ENST00000516664 135 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 RNA5SP503-201ENST00000517047 117 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.06□□□□□ -1.76
PRPF3O43395 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.06□□□□□ -1.76
PRPF3O43395 AC103843.2-201ENST00000530523 682 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF3O43395 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF3O43395 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.06□□□□□ -1.76
PRPF3O43395 AC011602.1-201ENST00000546484 331 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.06□□□□□ -1.76
PRPF3O43395 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.06□□□□□ -1.76
PRPF3O43395 AC024619.4-201ENST00000580924 316 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 MIR4775-201ENST00000581168 75 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 MIR3158-1-201ENST00000583596 81 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 AC012409.4-201ENST00000612923 249 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 AC090517.2-201ENST00000614966 680 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 AC006133.1-201ENST00000617106 264 ntBASIC4.06□□□□□ -1.76
PRPF3O43395 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.06□□□□□ -1.76
PRPF3O43395 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF3O43395 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PRPF3O43395 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.06□□□□□ -1.76
PRPF3O43395 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PRPF3O43395 ELF2P3-201ENST00000445099 1506 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRPF3O43395 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PRPF3O43395 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF3O43395 UBE2L2-201ENST00000254302 429 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 Y_RNA.409-201ENST00000383990 98 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF3O43395 RPL23AP69-201ENST00000431134 458 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 AC091286.1-201ENST00000431233 461 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 ATP5JP1-201ENST00000431631 322 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 AL591704.1-201ENST00000432574 275 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 AL591212.2-201ENST00000433923 257 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 AL512844.2-201ENST00000433990 593 ntBASIC4.05□□□□□ -1.76
PRPF3O43395 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms