Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 ZFRP1-201ENST00000457579 2970 ntBASIC3.73□□□□□ -1.81
HOXA3O43365 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA3O43365 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HOXA3O43365 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA3O43365 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA3O43365 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA3O43365 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA3O43365 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA3O43365 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA3O43365 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA3O43365 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA3O43365 RN7SKP227-201ENST00000364445 330 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 SNORA41-201ENST00000384675 132 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AL590762.2-201ENST00000395798 571 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 MIR548F4-201ENST00000408515 105 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 RNU6-55P-201ENST00000411092 107 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA3O43365 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA3O43365 AL356981.1-201ENST00000454879 684 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 DHFRP3-201ENST00000455595 559 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 RPL23AP31-201ENST00000456160 467 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC008571.1-201ENST00000467232 300 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 RPL21P126-201ENST00000470049 478 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC109327.1-201ENST00000471666 403 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC068781.1-201ENST00000488231 618 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA3O43365 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA3O43365 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
HOXA3O43365 AL359273.1-201ENST00000510918 627 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 SCARNA15.2-201ENST00000516409 127 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC005868.1-201ENST00000536421 331 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA3O43365 AL157871.3-201ENST00000557231 293 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC105129.1-201ENST00000560250 297 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 MIR3921-201ENST00000577308 85 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA3O43365 AC006006.1-201ENST00000603082 144 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 RNF138P2-201ENST00000603490 592 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA3O43365 AC067931.1-201ENST00000624190 671 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA3O43365 BMS1P21-201ENST00000634565 365 ntBASIC3.72□□□□□ -1.81
HOXA3O43365 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA3O43365 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HOXA3O43365 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HOXA3O43365 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA3O43365 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA3O43365 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA3O43365 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA3O43365 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA3O43365 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HOXA3O43365 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.71□□□□□ -1.81
HOXA3O43365 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.71□□□□□ -1.81
HOXA3O43365 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.71□□□□□ -1.81
HOXA3O43365 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HOXA3O43365 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HOXA3O43365 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HOXA3O43365 LINC01109-201ENST00000603837 3081 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA3O43365 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA3O43365 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA3O43365 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA3O43365 Y_RNA.33-201ENST00000362591 102 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 RNU1-94P-201ENST00000362627 173 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 RNA5SP509-201ENST00000364577 119 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 RNU6-395P-201ENST00000365662 106 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA3O43365 Y_RNA.557-201ENST00000384680 107 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.71□□□□□ -1.82
HOXA3O43365 AL030996.1-201ENST00000411430 235 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AC011933.1-201ENST00000413334 321 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA3O43365 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA3O43365 AL158156.1-201ENST00000422509 473 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 RPL7AP25-201ENST00000423357 805 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 MTCYBP9-201ENST00000431021 303 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 RPL35AP21-201ENST00000437667 333 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA3O43365 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA3O43365 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA3O43365 RPL23AP24-201ENST00000458203 385 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 RPS23P3-201ENST00000470993 430 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AC128713.1-201ENST00000471495 306 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AC007016.1-201ENST00000512110 244 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 MTCO2P24-201ENST00000515611 426 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 MIR892C-201ENST00000516410 77 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA3O43365 RPL23AP53-201ENST00000521854 457 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA3O43365 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA3O43365 OR8R1P-201ENST00000543943 764 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA3O43365 AL020997.2-201ENST00000602607 184 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AL160281.1-201ENST00000605307 311 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AC091979.2-201ENST00000607514 214 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AL591516.1-201ENST00000611326 274 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 RMST_4.1-201ENST00000616886 107 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 AC138305.3-201ENST00000624988 240 ntBASIC3.71□□□□□ -1.82
HOXA3O43365 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA3O43365 AC006971.1-201ENST00000407916 4486 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms