Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC009296.1-201ENST00000443146 155 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC124916.1-201ENST00000444020 547 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC016700.2-201ENST00000446011 156 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA2O43364 AC007395.1-201ENST00000451333 677 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AL049830.2-201ENST00000480072 201 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXA2O43364 RNU6-62P-201ENST00000516526 102 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 RNU7-110P-201ENST00000516891 62 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 SCARNA20.4-201ENST00000516969 131 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA2O43364 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA2O43364 MIR4458-201ENST00000578872 75 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA2O43364 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC244107.2-201ENST00000611773 76 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC091953.3-201ENST00000623220 236 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 AC138965.3-201ENST00000623875 498 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 SCARNA4-201ENST00000629045 128 ntBASIC5.66□□□□□ -1.5
HOXA2O43364 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXA2O43364 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA2O43364 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA2O43364 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HOXA2O43364 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA2O43364 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXA2O43364 GVINP1-202ENST00000531871 7271 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
HOXA2O43364 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXA2O43364 Y_RNA.245-201ENST00000364493 95 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 RNU6-336P-201ENST00000364891 107 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 RN7SKP153-201ENST00000365026 316 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA2O43364 RNU6-356P-201ENST00000384140 107 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.65□□□□□ -1.5
HOXA2O43364 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXA2O43364 RNU6-651P-201ENST00000411040 105 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 BMS1P22-201ENST00000414726 313 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 AL049745.1-201ENST00000433953 286 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 RPS20P22-201ENST00000473700 357 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 SNORA31.18-201ENST00000517043 134 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 AK6P2-201ENST00000549020 471 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXA2O43364 AL162431.4-201ENST00000604674 411 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 AC108706.1-201ENST00000611053 297 ntBASIC5.65□□□□□ -1.5
HOXA2O43364 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
HOXA2O43364 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.65□□□□□ -1.51
HOXA2O43364 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HOXA2O43364 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXA2O43364 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HOXA2O43364 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXA2O43364 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXA2O43364 MAPK10-263ENST00000641052 4307 ntBASIC5.65□□□□□ -1.51
HOXA2O43364 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HOXA2O43364 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA2O43364 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXA2O43364 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXA2O43364 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA2O43364 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA2O43364 RNA5SP90-201ENST00000364801 99 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 RNU6-17P-201ENST00000384245 107 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 RNU6-18P-201ENST00000384527 107 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 COX6B1P1-201ENST00000415962 213 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 AC091390.3-201ENST00000426478 338 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 AL590399.2-201ENST00000427536 309 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXA2O43364 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA2O43364 snoU13.20-201ENST00000459180 104 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXA2O43364 AL160314.1-201ENST00000490836 438 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 HMGB3P16-201ENST00000508037 287 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 AC006427.1-201ENST00000514359 712 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXA2O43364 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA2O43364 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HOXA2O43364 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXA2O43364 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA2O43364 AC091953.5-201ENST00000622919 233 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA2O43364 U4.7-201ENST00000638126 106 ntBASIC5.64□□□□□ -1.51
HOXA2O43364 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA2O43364 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXA2O43364 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXA2O43364 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA2O43364 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA2O43364 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA2O43364 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
HOXA2O43364 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXA2O43364 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXA2O43364 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXA2O43364 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXA2O43364 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 RNU6-1290P-201ENST00000362957 109 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 RNU6-923P-201ENST00000364753 107 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 RNU6-968P-201ENST00000384076 107 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 Y_RNA.435-201ENST00000384095 112 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 RNU6-22P-201ENST00000384355 107 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 SNORA40C-201ENST00000391285 128 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 RPS4XP3-201ENST00000398541 413 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 MTCO1P39-201ENST00000426148 480 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms