Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC103710.2-201ENST00000609912 942 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 SDR42E1P2-201ENST00000614861 481 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 SDR42E1P4-201ENST00000620894 481 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AC012150.2-201ENST00000621300 544 ntBASIC1.49□□□□□ -2.17
SDCBPO00560 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.49□□□□□ -2.17
SDCBPO00560 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.49□□□□□ -2.17
SDCBPO00560 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
SDCBPO00560 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.48□□□□□ -2.17
SDCBPO00560 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SDCBPO00560 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SDCBPO00560 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SDCBPO00560 RNU5E-8P-201ENST00000363502 116 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 SNRPEP2-201ENST00000397592 279 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 TMSB4XP8-201ENST00000402089 135 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 CIR1P3-201ENST00000405137 479 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 RNU4-26P-201ENST00000410270 107 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 VN1R51P-201ENST00000411675 945 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 TMSB4XP6-201ENST00000415187 135 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.48□□□□□ -2.17
SDCBPO00560 FAM204CP-201ENST00000424489 642 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 TMSB4XP1-201ENST00000424567 135 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.48□□□□□ -2.17
SDCBPO00560 Z82210.1-201ENST00000440037 231 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 PIGFP3-201ENST00000441918 722 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 RPL32P28-201ENST00000443577 397 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.48□□□□□ -2.17
SDCBPO00560 MRPL42P4-201ENST00000453267 443 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.48□□□□□ -2.17
SDCBPO00560 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.48□□□□□ -2.17
SDCBPO00560 ATG12P2-201ENST00000456830 416 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AC026410.2-201ENST00000460281 156 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AC105252.1-201ENST00000503089 286 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 TMEM251P1-201ENST00000503717 318 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.48□□□□□ -2.17
SDCBPO00560 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.48□□□□□ -2.17
SDCBPO00560 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.48□□□□□ -2.17
SDCBPO00560 AC010186.2-204ENST00000537668 439 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AC125611.1-201ENST00000549563 229 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 YWHAZP1-201ENST00000556286 722 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AC044913.1-201ENST00000557200 430 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 LINC00557-201ENST00000563184 1279 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AC122134.1-202ENST00000569111 1201 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AC138915.2-201ENST00000569776 97 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AL096840.1-201ENST00000603287 93 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AL603758.1-201ENST00000618654 241 ntBASIC1.48□□□□□ -2.17
SDCBPO00560 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.48□□□□□ -2.17
SDCBPO00560 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SDCBPO00560 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC010329.5-201ENST00000623497 2174 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 SNRPEP3-201ENST00000338402 276 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 MIR583-201ENST00000384846 75 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.47□□□□□ -2.17
SDCBPO00560 AL158053.1-201ENST00000441503 453 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.47□□□□□ -2.17
SDCBPO00560 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.47□□□□□ -2.17
SDCBPO00560 RPL39P6-201ENST00000448289 150 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 RPL12P25-201ENST00000455592 494 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC068587.2-201ENST00000478386 781 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AC034222.1-201ENST00000494052 532 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 RPS29P11-201ENST00000496507 171 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC098591.2-201ENST00000510152 315 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 RNA5SP182-201ENST00000516064 82 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 SNORA31.6-201ENST00000516241 130 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 RNU6-528P-201ENST00000516926 100 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.47□□□□□ -2.17
SDCBPO00560 AC100814.1-201ENST00000606963 623 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AC093673.2-201ENST00000609674 331 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AP001486.3-201ENST00000615334 372 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 AC010975.3-201ENST00000618727 978 ntBASIC1.47□□□□□ -2.17
SDCBPO00560 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.47□□□□□ -2.17
SDCBPO00560 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SDCBPO00560 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SDCBPO00560 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SDCBPO00560 AC103710.2-202ENST00000641454 2853 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.46□□□□□ -2.18
SDCBPO00560 SNORD114-1-201ENST00000362705 72 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 RNA5SP125-201ENST00000364843 120 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 RNA5SP126-201ENST00000365092 109 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 RNU6-234P-201ENST00000365229 104 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 RNU1-39P-201ENST00000383897 165 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 RNU6-1300P-201ENST00000391046 108 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 SNORA40.18-201ENST00000391200 128 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 RPL23AP39-201ENST00000415533 405 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.46□□□□□ -2.18
SDCBPO00560 AL645568.3-201ENST00000433683 316 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms