Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXN3O00409 AC006989.1-201ENST00000427212 131 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AC009237.8-201ENST00000445492 379 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 CBWD4P-201ENST00000445695 655 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 RPS29P31-201ENST00000446147 164 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXN3O00409 DPPA3P1-201ENST00000448050 469 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AL162395.1-201ENST00000457882 422 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 RNU7-182P-201ENST00000459009 62 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 RPL7P5-201ENST00000471472 736 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.87□□□□□ -1.79
FOXN3O00409 KC877373.1-201ENST00000479066 408 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXN3O00409 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXN3O00409 RNU6-123P-201ENST00000516163 102 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 Y_RNA.693-201ENST00000516641 110 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 RNA5SP503-201ENST00000517047 117 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 IGHV3-76-201ENST00000522465 295 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AC118273.2-201ENST00000532092 465 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXN3O00409 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.87□□□□□ -1.79
FOXN3O00409 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXN3O00409 AC025678.1-201ENST00000567861 338 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AC007621.1-201ENST00000604544 437 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AL670379.4-201ENST00000605279 254 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AC092628.2-201ENST00000622492 339 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXN3O00409 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXN3O00409 AC119674.1-207ENST00000641355 633 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXN3O00409 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXN3O00409 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXN3O00409 API5P2-201ENST00000397055 1498 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN3O00409 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN3O00409 UBE2L2-201ENST00000254302 429 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 SNORA72.1-201ENST00000363485 129 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 RNA5SP51-201ENST00000364750 119 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN3O00409 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN3O00409 Y_RNA.481-201ENST00000384373 102 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 RNU6-1158P-201ENST00000391167 107 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 RNU6-876P-201ENST00000391295 104 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 UBE2V1P2-201ENST00000397758 440 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 SNORA57.3-201ENST00000411095 141 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 OR51A5P-201ENST00000415429 942 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 USP9YP27-201ENST00000418455 438 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN3O00409 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN3O00409 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXN3O00409 AC000111.3-201ENST00000433478 193 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AL591212.2-201ENST00000433923 257 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 NDUFB4P6-201ENST00000436819 366 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 PRDX3P3-201ENST00000447765 522 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 FDX1P2-201ENST00000450769 375 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 RNA5SP310-201ENST00000459084 116 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 RNU6-953P-201ENST00000459154 107 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
FOXN3O00409 AC233702.1-201ENST00000482905 502 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
FOXN3O00409 RBBP4P6-201ENST00000508098 202 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 RNU6-1281P-201ENST00000516223 105 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 RNU6-579P-201ENST00000516879 102 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 RNA5SP471-201ENST00000516971 106 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXN3O00409 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN3O00409 AP006245.1-201ENST00000522549 120 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 OR5AQ1P-201ENST00000527596 927 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN3O00409 AL512310.1-201ENST00000548639 172 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AC024619.4-201ENST00000580924 316 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AC005730.3-201ENST00000583067 366 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AP001330.5-201ENST00000607176 411 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AC104458.1-201ENST00000608243 463 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 AC093788.1-201ENST00000609356 927 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN3O00409 AL390240.1-201ENST00000612950 384 ntBASIC3.86□□□□□ -1.79
FOXN3O00409 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXN3O00409 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXN3O00409 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXN3O00409 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN3O00409 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXN3O00409 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN3O00409 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXN3O00409 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXN3O00409 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXN3O00409 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXN3O00409 RNU6-1287P-201ENST00000362914 107 ntBASIC3.85□□□□□ -1.79
FOXN3O00409 RNU6-1322P-201ENST00000364309 107 ntBASIC3.85□□□□□ -1.79
FOXN3O00409 RNU6-61P-201ENST00000365528 109 ntBASIC3.85□□□□□ -1.79
FOXN3O00409 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXN3O00409 RNU6-1029P-201ENST00000384109 107 ntBASIC3.85□□□□□ -1.79
FOXN3O00409 RNU6-14P-201ENST00000384630 106 ntBASIC3.85□□□□□ -1.79
FOXN3O00409 RNU6-1060P-201ENST00000384664 107 ntBASIC3.85□□□□□ -1.79
FOXN3O00409 SNORD37.1-201ENST00000390968 65 ntBASIC3.85□□□□□ -1.79
FOXN3O00409 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXN3O00409 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXN3O00409 ZNF90P2-204ENST00000419323 1075 ntBASIC3.85□□□□□ -1.79
FOXN3O00409 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXN3O00409 MTCYBP8-201ENST00000422855 651 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms