Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFXAPO00287 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFXAPO00287 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFXAPO00287 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFXAPO00287 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RFXAPO00287 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RFXAPO00287 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFXAPO00287 Y_RNA.64-201ENST00000362845 102 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 Y_RNA.150-201ENST00000363562 102 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 RNU6-213P-201ENST00000384051 104 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 RNU6-432P-201ENST00000384196 109 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 RNU6-1226P-201ENST00000384317 107 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RFXAPO00287 RN7SKP156-201ENST00000410308 342 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 RPL36AP10-201ENST00000421785 322 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 AC139712.2-201ENST00000424302 339 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 PIGPP3-201ENST00000425307 415 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 USMG5P1-201ENST00000425964 177 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 AL139099.1-201ENST00000497398 403 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.46□□□□□ -1.7
RFXAPO00287 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.46□□□□□ -1.7
RFXAPO00287 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.46□□□□□ -1.7
RFXAPO00287 AC108078.2-201ENST00000510750 236 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.46□□□□□ -1.7
RFXAPO00287 RNU6-1023P-201ENST00000516137 106 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 RNU6-1069P-201ENST00000516612 133 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 Y_RNA.715-201ENST00000517082 110 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 RNU6-111P-201ENST00000517179 105 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFXAPO00287 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.46□□□□□ -1.7
RFXAPO00287 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.46□□□□□ -1.7
RFXAPO00287 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.46□□□□□ -1.7
RFXAPO00287 MIR4293-201ENST00000584305 78 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 AC110743.1-201ENST00000584870 478 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.46□□□□□ -1.7
RFXAPO00287 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFXAPO00287 AC103858.2-201ENST00000621471 543 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 CR392039.4-201ENST00000624968 501 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.46□□□□□ -1.7
RFXAPO00287 AL596275.2-204ENST00000641628 552 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 AL596275.2-206ENST00000641957 626 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFXAPO00287 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.46□□□□□ -1.7
RFXAPO00287 AC107068.1-201ENST00000563286 4218 ntBASIC4.46□□□□□ -1.7
RFXAPO00287 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
RFXAPO00287 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFXAPO00287 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RFXAPO00287 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.46□□□□□ -1.7
RFXAPO00287 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RFXAPO00287 PROS2P-201ENST00000474651 1951 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.45□□□□□ -1.7
RFXAPO00287 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.45□□□□□ -1.7
RFXAPO00287 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFXAPO00287 RNU4-44P-201ENST00000363050 141 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 RNY3P11-201ENST00000364153 102 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 Y_RNA.214-201ENST00000364201 112 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 Y_RNA.380-201ENST00000365663 111 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 Y_RNA.424-201ENST00000384063 103 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 RNU6-187P-201ENST00000384139 106 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 RNU6-842P-201ENST00000384269 107 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 Y_RNA.562-201ENST00000384695 113 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 U8.11-201ENST00000384699 133 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 U8.12-201ENST00000384701 133 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 MIR1252-201ENST00000408861 65 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 AC234781.4-201ENST00000419384 244 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 RPL21P109-201ENST00000422213 475 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 FTLP19-201ENST00000433300 394 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 MRPS18BP2-201ENST00000434310 759 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 CYCSP43-201ENST00000438233 310 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 PRDX3P3-201ENST00000447765 522 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 AC007967.1-201ENST00000455422 1159 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 U8.18-201ENST00000459285 133 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 RPL21P8-201ENST00000465083 535 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.45□□□□□ -1.7
RFXAPO00287 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.45□□□□□ -1.7
RFXAPO00287 RNU6-475P-201ENST00000516073 104 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.45□□□□□ -1.7
RFXAPO00287 HSPE1P20-201ENST00000538133 289 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 SETP2-201ENST00000553886 926 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.45□□□□□ -1.7
RFXAPO00287 RPL23AP84-201ENST00000571193 464 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 MIR4504-201ENST00000577413 92 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.45□□□□□ -1.7
RFXAPO00287 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.45□□□□□ -1.7
RFXAPO00287 RPL23AP92-201ENST00000603609 255 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 RAC1P9-201ENST00000604990 392 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 MTND4LP5-201ENST00000605152 292 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 AC012443.1-201ENST00000605605 231 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 FP236240.3-201ENST00000623061 327 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.45□□□□□ -1.7
RFXAPO00287 AP001273.1-201ENST00000624493 3152 ntBASIC4.45□□□□□ -1.7
RFXAPO00287 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RFXAPO00287 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.45□□□□□ -1.7
RFXAPO00287 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFXAPO00287 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RFXAPO00287 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.44□□□□□ -1.7
RFXAPO00287 BTBD10P1-201ENST00000549824 1352 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RFXAPO00287 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RFXAPO00287 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms