Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 RNU4-29P-201ENST00000515943 174 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 HIGD1AP6-201ENST00000521833 279 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 HSPA8P13-201ENST00000523715 472 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AP003497.1-201ENST00000528472 562 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 LSM6P2-201ENST00000552208 177 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AC005668.1-201ENST00000571142 476 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 SNORD53B-201ENST00000577887 78 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 SUMO2P14-201ENST00000604488 293 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 YWHAEP7-203ENST00000622054 312 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 AL118508.4-201ENST00000624142 1176 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 HPVC1-201ENST00000629899 1198 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 ZNF680P1-201ENST00000436625 1469 ntBASIC0.73□□□□□ -2.29
CHKB-CPT1BH3BT56 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 RNA5SP289-201ENST00000362332 137 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 SNORA25B-201ENST00000365507 128 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 MIR514A1-201ENST00000385133 98 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AL031679.1-201ENST00000400616 525 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 ATP5F1P6-201ENST00000402768 767 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 PIGPP2-201ENST00000411569 458 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AL449283.1-202ENST00000418249 604 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 PAICSP7-201ENST00000419829 962 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 MRPL35P3-201ENST00000421557 364 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 BPY2DP-201ENST00000422208 265 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AL354695.1-201ENST00000427935 228 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC096638.1-201ENST00000444678 216 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AL353705.4-201ENST00000449661 238 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 RNA5SP57-201ENST00000459463 123 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC005908.1-201ENST00000468701 347 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC103987.1-201ENST00000473394 348 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC126389.1-201ENST00000477436 290 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC132942.1-201ENST00000486753 483 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC093767.1-201ENST00000504523 156 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 HIGD1AP5-201ENST00000529959 259 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AP003034.1-201ENST00000534621 422 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC019288.1-201ENST00000557918 224 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 HSPE1P19-201ENST00000603327 295 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC021646.1-201ENST00000605469 484 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC087241.4-201ENST00000612441 480 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AC108479.2-201ENST00000617314 601 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CHKB-CPT1BH3BT56 AL359854.1-201ENST00000614203 1594 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORA62.1-201ENST00000364287 154 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 RNA5SP240-201ENST00000365355 128 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 MIR583-201ENST00000384846 75 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 MIR95-201ENST00000385072 81 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORA67.6-201ENST00000391093 99 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 RNA5SP465-201ENST00000391195 109 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 ZNF863P-201ENST00000426746 417 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 USP9YP35-201ENST00000435696 412 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 ARPC3P5-201ENST00000448802 534 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 USP9YP10-201ENST00000454868 628 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORD97-201ENST00000459187 142 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 TRBV1-201ENST00000476502 284 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AC018868.1-201ENST00000491307 315 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 CAB39P1-201ENST00000502277 460 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AC097462.2-201ENST00000504623 481 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 RNU6-491P-201ENST00000516099 110 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 RNU6-902P-201ENST00000517212 91 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORA31.24-201ENST00000517232 57 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 RPL21P5-201ENST00000554662 472 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AC026271.5-201ENST00000577873 130 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AC024619.4-201ENST00000580924 316 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 MIR4295-201ENST00000585286 85 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 SRGNP1-201ENST00000603392 451 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 FTX_3.1-201ENST00000610451 147 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AC099842.1-201ENST00000619919 596 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 PCNP-208ENST00000627393 136 ntTSL 2 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AC110994.2-201ENST00000635481 492 ntBASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 FTO-223ENST00000640179 210 ntTSL 5 BASIC0.71□□□□□ -2.3
CHKB-CPT1BH3BT56 AP000560.1-201ENST00000624150 1937 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms