Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RPS27P27-201ENST00000498779 255 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AL121821.2-201ENST00000556081 394 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 MTND1P8-201ENST00000571424 950 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC136624.4-201ENST00000573044 370 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 MIR5680-201ENST00000577577 84 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 MIR3160-1-201ENST00000577972 85 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC069294.1-201ENST00000608397 350 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC010297.1-201ENST00000623948 149 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC007490.1-201ENST00000624321 703 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 CU459211.1-201ENST00000635667 749 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 AC073346.2-201ENST00000624724 2058 ntBASIC1.97□□□□□ -2.09
SMKR1H3BMG3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.09
SMKR1H3BMG3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 FAM133CP-201ENST00000332869 704 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 RNA5SP181-201ENST00000410246 98 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 BX276092.3-201ENST00000424182 230 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AL451062.2-201ENST00000427515 271 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 RPL30P4-201ENST00000429309 333 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 Z98742.2-201ENST00000431564 187 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 MTND1P32-201ENST00000433043 938 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC009961.3-201ENST00000449832 765 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 DUXAP8-207ENST00000456786 622 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 MRPL42P6-201ENST00000486397 371 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 SRIP1-201ENST00000489235 288 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 RPL39P36-201ENST00000490784 156 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AP005902.1-201ENST00000521358 186 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 MTND4P33-201ENST00000556706 766 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 ROCK1P1-201ENST00000573767 549 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC073544.2-201ENST00000601155 540 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 KC877982.1-201ENST00000602313 470 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC008277.2-201ENST00000605196 797 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC007619.2-201ENST00000605743 379 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AL139418.1-201ENST00000613613 177 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC245884.12-201ENST00000615364 59 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 PISRT1-201ENST00000626175 531 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AL359854.1-201ENST00000614203 1594 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AC106754.1-201ENST00000562632 1513 ntBASIC1.96□□□□□ -2.1
SMKR1H3BMG3 AL109809.4-201ENST00000603520 2185 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AC104454.1-201ENST00000421341 1401 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 RNU6-188P-201ENST00000364207 107 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MIR554-201ENST00000384874 96 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MIR524-201ENST00000385242 87 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MIR147B-201ENST00000390185 80 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 PTGES3P4-201ENST00000426243 356 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 HSFY7P-201ENST00000432672 318 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 RPS20P5-201ENST00000434808 360 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 HSFY8P-201ENST00000437934 318 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 NEFMP1-201ENST00000443423 1006 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 IFNA11P-201ENST00000446352 526 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 HSFY5P-201ENST00000453726 309 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AC091951.3-201ENST00000504093 246 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 RNU6-143P-201ENST00000516942 93 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MTATP6P15-201ENST00000527233 835 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AGGF1P5-201ENST00000567900 919 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AL356432.3-201ENST00000568952 465 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AC105245.1-201ENST00000581934 244 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MIR4307-201ENST00000582802 84 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MIR4635-201ENST00000583759 79 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 NRBF2P1-201ENST00000587407 859 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AC112187.2-201ENST00000604345 283 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AL109620.1-201ENST00000618738 1197 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AL356863.1-201ENST00000623378 1080 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 AC025048.6-202ENST00000627667 438 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms