Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU5E-1-201ENST00000362477 120 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 RNA5SP383-201ENST00000362934 120 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 RNU6-511P-201ENST00000363496 107 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 U3.11-201ENST00000364476 212 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 CD24P4-201ENST00000382840 243 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 RNU6-198P-201ENST00000384258 104 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 RNU6-140P-201ENST00000384566 108 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC099548.1-201ENST00000421443 426 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 RAC1P6-201ENST00000423911 575 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 RPL35AP12-201ENST00000425362 338 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC093106.2-201ENST00000428212 385 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 SETP8-201ENST00000435341 628 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 PGBD4P3-201ENST00000440731 581 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 NEFMP1-201ENST00000443423 1006 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 MTND6P13-201ENST00000443510 523 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 NANOGNBP1-201ENST00000448444 480 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 MTND1P12-201ENST00000455231 147 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 SNORD97-201ENST00000459187 142 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 SNORA59A-201ENST00000459326 152 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 RPS3AP14-201ENST00000483907 780 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC011825.1-201ENST00000484967 388 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 ARL4AP2-201ENST00000507378 601 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 NDUFB4P2-201ENST00000509515 391 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 RNU2-10P-201ENST00000516375 211 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 Y_RNA.695-201ENST00000516715 107 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC009812.2-201ENST00000517657 457 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AP006587.4-201ENST00000526053 529 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC011979.2-201ENST00000527568 352 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC137800.2-201ENST00000574375 120 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AL161629.2-201ENST00000615347 275 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 FRG1KP-201ENST00000623592 341 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC110994.2-201ENST00000635481 492 ntBASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
NPIPA3F8WFD2 AC092435.3-201ENST00000565538 3654 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 FTLP6-201ENST00000355274 422 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 RNU6-1167P-201ENST00000363227 94 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 RNU4-1-201ENST00000363925 141 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 RNU1-140P-201ENST00000365040 165 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 RNU6-217P-201ENST00000384164 104 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AL139397.2-201ENST00000404529 772 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 RPS7P13-201ENST00000413955 498 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 SEPT2P1-201ENST00000419651 180 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 ELOCP4-201ENST00000420090 333 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 ZNF863P-201ENST00000426746 417 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 HMGB1P27-201ENST00000431429 603 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AL022238.1-201ENST00000442557 355 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 MTND2P22-201ENST00000444325 1033 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 ELOCP23-201ENST00000452014 332 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 RPL12P25-201ENST00000455592 494 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 snoU109.1-201ENST00000459339 135 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC233702.1-201ENST00000482905 502 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC008885.1-201ENST00000514930 301 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 RNA5SP471-201ENST00000516971 106 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AP002453.2-201ENST00000533503 320 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 EIF4BP1-201ENST00000554881 351 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 MIR4506-201ENST00000584693 77 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 SEPT7P9-203ENST00000604116 343 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC136601.2-201ENST00000604356 474 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AL161729.4-201ENST00000604650 476 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AL137843.1-201ENST00000605078 385 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC007619.2-201ENST00000605743 379 ntBASIC2.84□□□□□ -1.95
NPIPA3F8WFD2 AC091304.9-201ENST00000612091 226 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms