Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 MIR4769-201ENST00000584126 77 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 MIR4298-201ENST00000584380 73 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AC021749.1-201ENST00000604322 607 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AC007038.2-201ENST00000608095 740 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 DUSP12P1-201ENST00000612874 516 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
CPSF4LA6NMK7 RNU6-1243P-201ENST00000364028 107 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 RNU6-1251P-201ENST00000364502 107 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 Y_RNA.595-201ENST00000410403 105 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 RNU6-1328P-201ENST00000410938 106 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 RPS15AP38-201ENST00000413110 372 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL714022.1-201ENST00000439897 151 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC092473.1-201ENST00000441098 221 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC016691.1-201ENST00000441321 413 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 BMI1P1-201ENST00000445879 941 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC116337.2-201ENST00000477662 156 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 RPS27P23-201ENST00000487608 251 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 RNU6-1308P-201ENST00000516817 103 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AP005136.1-201ENST00000579765 429 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 MIR548Y-201ENST00000582739 110 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.6-201ENST00000603753 252 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.11-201ENST00000604059 253 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.10-201ENST00000604330 253 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC008162.1-201ENST00000604718 254 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.1-201ENST00000604752 252 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.2-201ENST00000604983 252 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.5-201ENST00000605253 252 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.4-201ENST00000605279 254 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.12-201ENST00000605291 253 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.8-201ENST00000605353 252 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.9-201ENST00000605428 253 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 PRR13P7-201ENST00000605538 430 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL670379.7-201ENST00000605823 252 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC008121.3-201ENST00000618726 433 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AC027309.3-201ENST00000623419 351 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AP006248.3-201ENST00000623580 594 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 AL136313.1-201ENST00000624804 202 ntBASIC0.77□□□□□ -2.29
CPSF4LA6NMK7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AL513185.3-201ENST00000433335 1300 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 ZNF29P-201ENST00000225587 168 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 MIR26B-201ENST00000362251 77 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 BTF3L4P2-201ENST00000392798 346 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AL158823.1-201ENST00000418441 478 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 OFD1P18Y-201ENST00000420889 959 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AC244636.1-201ENST00000421152 228 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AL109913.1-201ENST00000421173 514 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 SFR1P2-201ENST00000421841 730 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 DNAJC19P4-201ENST00000440115 345 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 RNU6-1004P-201ENST00000516584 111 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AL355877.2-201ENST00000603670 358 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AL359821.1-201ENST00000605519 182 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 AP003485.1-201ENST00000625093 753 ntBASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.76□□□□□ -2.29
CPSF4LA6NMK7 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 RNU2-68P-201ENST00000410878 191 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 RPL30P13-201ENST00000418873 348 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 AC006548.1-201ENST00000427470 102 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 EZH2P1-201ENST00000431167 291 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 GTF2IP20-201ENST00000431663 360 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 AC104689.1-201ENST00000473356 768 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 OR52A4P-202ENST00000481634 799 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 RNA5SP165-201ENST00000517142 115 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 OR5B19P-201ENST00000531766 928 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 AC118273.2-201ENST00000532092 465 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 VN1R107P-201ENST00000601784 209 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 AL078605.1-201ENST00000603529 500 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms