Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RN7SL293P-201ENST00000481765 281 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 RNU6-927P-201ENST00000516199 100 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 DUXAP2-201ENST00000519198 589 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 AL163153.1-201ENST00000554223 283 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 RPS3AP4-201ENST00000555161 764 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AL022154.1-201ENST00000604698 785 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC007363.1-201ENST00000604736 620 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC008962.1-201ENST00000605729 304 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC015540.1-201ENST00000615828 501 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AL731566.2-201ENST00000618971 317 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC138649.3-201ENST00000622154 254 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 AC084035.1-201ENST00000634543 607 ntBASIC3.36□□□□□ -1.87
LRRC53A6NM62 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC53A6NM62 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC53A6NM62 MIR134-201ENST00000385258 73 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 BTF3L4P3-201ENST00000418879 476 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 TMEM167AP1-201ENST00000423409 219 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AL353705.1-201ENST00000433468 480 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 NEFMP1-201ENST00000443423 1006 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC132479.1-201ENST00000449160 144 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 RPL7P5-201ENST00000471472 736 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 RN7SL20P-201ENST00000488827 297 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 RPL30P5-201ENST00000494923 336 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC026427.2-201ENST00000506228 536 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 SNORA31.3-201ENST00000516029 96 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC011611.1-201ENST00000552179 197 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC245505.1-201ENST00000556398 224 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 AL121992.2-201ENST00000606262 256 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC107294.3-201ENST00000609211 526 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 AC027309.3-201ENST00000623419 351 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 SNORA50A-202ENST00000629536 136 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 CUL1P1-201ENST00000509510 2425 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 MTND5P27-201ENST00000428871 1720 ntBASIC3.35□□□□□ -1.87
LRRC53A6NM62 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC53A6NM62 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
LRRC53A6NM62 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC53A6NM62 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC53A6NM62 Y_RNA.296-201ENST00000364930 108 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC53A6NM62 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC53A6NM62 GSTA9P-201ENST00000406231 611 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 FAT1P1-201ENST00000406588 507 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC114491.1-201ENST00000416095 246 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 MED13P1-201ENST00000428342 171 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 GPR143P-201ENST00000434155 205 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 AL451074.3-201ENST00000437709 472 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 PIGFP3-201ENST00000441918 722 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC53A6NM62 Z75741.1-201ENST00000446793 314 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 RPS20P22-201ENST00000473700 357 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 KC877373.1-201ENST00000479066 408 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 AL135752.1-201ENST00000479477 471 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC108078.1-201ENST00000508073 725 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 OR5G4P-201ENST00000525251 760 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC098848.2-201ENST00000588023 330 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 Z84480.1-201ENST00000605131 311 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC084782.3-201ENST00000612282 578 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.34□□□□□ -1.87
LRRC53A6NM62 MTND1P37-201ENST00000636562 264 ntBASIC3.34□□□□□ -1.87
LRRC53A6NM62 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms