Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU7-167P-201ENST00000459160 62 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 RNU7-143P-201ENST00000516781 65 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AP003122.3-201ENST00000526316 255 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC084851.1-201ENST00000529105 249 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC091516.1-201ENST00000549191 703 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 MIR1273C-201ENST00000578669 77 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 BNIP3P25-201ENST00000596023 559 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC012119.1-201ENST00000603184 222 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AL592436.1-201ENST00000605135 558 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC004805.2-201ENST00000605382 482 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 CTHRC1P1-201ENST00000605383 469 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 LARP7P1-201ENST00000605576 316 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC005858.4-201ENST00000623191 700 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC027309.3-201ENST00000623419 351 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC022418.1-201ENST00000624118 445 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 ZNF807-201ENST00000328088 1707 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AF127577.6-201ENST00000623352 2191 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 CUL1P1-201ENST00000509510 2425 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 MIR208A-201ENST00000362287 71 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 RNU6-140P-201ENST00000384566 108 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 RNU6-1179P-201ENST00000384667 107 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 RNU6-510P-201ENST00000391239 108 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 RNU2-68P-201ENST00000410878 191 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 RPL23AP69-201ENST00000431134 458 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AL360271.2-201ENST00000447710 161 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 FAM206BP-201ENST00000510179 541 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 RNU4-49P-201ENST00000516080 140 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC005668.1-201ENST00000571142 476 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC008739.3-201ENST00000603262 127 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC136601.2-201ENST00000604356 474 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AC064801.1-201ENST00000612025 407 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 uc_338.32-201ENST00000615087 172 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 CR392039.5-201ENST00000623201 510 ntBASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MBD3L4A6NDZ8 AL161912.2-201ENST00000565707 3007 ntBASIC3.59□□□□□ -1.84
MBD3L4A6NDZ8 AC016588.2-201ENST00000632484 3021 ntBASIC3.59□□□□□ -1.84
MBD3L4A6NDZ8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.59□□□□□ -1.84
MBD3L4A6NDZ8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.59□□□□□ -1.84
MBD3L4A6NDZ8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-1252P-201ENST00000363054 104 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 RNA5SP387-201ENST00000364226 106 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-371P-201ENST00000364283 108 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 Y_RNA.399-201ENST00000383955 105 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-213P-201ENST00000384051 104 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 RN7SKP53-201ENST00000411337 315 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 USP9YP20-201ENST00000419224 558 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms