Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC118942.1-201ENST00000529674 1035 ntBASIC1.04□□□□□ -2.24
CNOT1A5YKK6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.04□□□□□ -2.24
CNOT1A5YKK6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CNOT1A5YKK6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.03□□□□□ -2.24
CNOT1A5YKK6 CCT4P2-201ENST00000233836 1548 ntBASIC1.03□□□□□ -2.24
CNOT1A5YKK6 AL606495.1-201ENST00000422100 813 ntBASIC1.03□□□□□ -2.24
CNOT1A5YKK6 ARF4P4-201ENST00000439608 520 ntBASIC1.03□□□□□ -2.24
CNOT1A5YKK6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.03□□□□□ -2.24
CNOT1A5YKK6 AC090897.2-201ENST00000581715 130 ntBASIC1.03□□□□□ -2.24
CNOT1A5YKK6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.03□□□□□ -2.24
CNOT1A5YKK6 MIR7974-201ENST00000615835 79 ntBASIC1.03□□□□□ -2.24
CNOT1A5YKK6 AC079597.1-201ENST00000624306 508 ntBASIC1.03□□□□□ -2.24
CNOT1A5YKK6 RNU6-288P-201ENST00000363690 104 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 MIR767-201ENST00000390228 109 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 SNORA46.1-201ENST00000391069 153 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.03□□□□□ -2.25
CNOT1A5YKK6 HMGB3P31-201ENST00000413333 595 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.03□□□□□ -2.25
CNOT1A5YKK6 MTND2P9-201ENST00000422293 931 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 RPL31P63-201ENST00000422565 375 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 AL512661.1-201ENST00000434586 1253 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.03□□□□□ -2.25
CNOT1A5YKK6 AP001486.3-201ENST00000615334 372 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 AC116618.1-201ENST00000634617 774 ntBASIC1.03□□□□□ -2.25
CNOT1A5YKK6 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
CNOT1A5YKK6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.02□□□□□ -2.25
CNOT1A5YKK6 OSTCP8-201ENST00000445117 448 ntBASIC1.02□□□□□ -2.25
CNOT1A5YKK6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
CNOT1A5YKK6 AC114322.1-201ENST00000506771 926 ntBASIC1.02□□□□□ -2.25
CNOT1A5YKK6 RN7SKP277-201ENST00000516895 283 ntBASIC1.02□□□□□ -2.25
CNOT1A5YKK6 RNA5SP471-201ENST00000516971 106 ntBASIC1.02□□□□□ -2.25
CNOT1A5YKK6 AC083923.1-201ENST00000523708 376 ntBASIC1.02□□□□□ -2.25
CNOT1A5YKK6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.02□□□□□ -2.25
CNOT1A5YKK6 U73023.1-201ENST00000603134 700 ntBASIC1.02□□□□□ -2.25
CNOT1A5YKK6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.02□□□□□ -2.25
CNOT1A5YKK6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CNOT1A5YKK6 MFSD8-213ENST00000641134 1327 ntBASIC1.02□□□□□ -2.25
CNOT1A5YKK6 AP000648.3-201ENST00000623539 4507 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 SNORD56-201ENST00000413522 71 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.01□□□□□ -2.25
CNOT1A5YKK6 RNU7-27P-201ENST00000459281 62 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 RPL7P18-201ENST00000478965 734 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.01□□□□□ -2.25
CNOT1A5YKK6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.01□□□□□ -2.25
CNOT1A5YKK6 ERHP1-201ENST00000523006 310 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AC023050.2-201ENST00000544968 387 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AL713998.2-201ENST00000604538 1198 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 MIR6759-201ENST00000638110 65 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.01□□□□□ -2.25
CNOT1A5YKK6 RNU1-52P-201ENST00000384190 164 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 RNU6-17P-201ENST00000384245 107 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 RNU6-18P-201ENST00000384527 107 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 CIR1P3-201ENST00000405137 479 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AL355497.1-201ENST00000406262 551 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 FCF1P2-201ENST00000415284 583 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 RPL21P32-201ENST00000419877 477 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AL356867.1-201ENST00000429623 299 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 BZW1P2-201ENST00000473537 826 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AC004062.1-201ENST00000509926 645 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AC087272.1-201ENST00000523624 533 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AC069304.3-201ENST00000603938 1084 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 AC110491.1-201ENST00000562191 2010 ntBASIC1.01□□□□□ -2.25
CNOT1A5YKK6 MRPS36P1-201ENST00000421291 307 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 RPL31P20-201ENST00000449593 360 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1□□□□□ -2.25
CNOT1A5YKK6 RPL30P12-201ENST00000474666 353 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 RPS27P21-201ENST00000486977 252 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 AL158032.1-201ENST00000605401 106 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 RNU1-78P-201ENST00000391248 165 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 HMGB1P49-201ENST00000418882 569 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1□□□□□ -2.25
CNOT1A5YKK6 AC079148.1-201ENST00000565944 819 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1□□□□□ -2.25
CNOT1A5YKK6 MTND4LP24-201ENST00000572277 291 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 MIR3117-201ENST00000584034 78 ntBASIC1□□□□□ -2.25
CNOT1A5YKK6 AC074117.2-201ENST00000417130 397 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 AL353689.1-201ENST00000438895 199 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 snoU13.19-201ENST00000459148 104 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 RPL30P11-201ENST00000495304 339 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.99□□□□□ -2.25
CNOT1A5YKK6 RNA5SP285-201ENST00000516619 119 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.99□□□□□ -2.25
CNOT1A5YKK6 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.99□□□□□ -2.25
CNOT1A5YKK6 RNU6-629P-201ENST00000384061 103 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 Z99497.1-201ENST00000421282 135 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 Z95118.1-201ENST00000421372 247 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 RNF2P1-201ENST00000442955 1010 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 RPS15AP34-201ENST00000487776 387 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.99□□□□□ -2.25
CNOT1A5YKK6 AC107954.1-201ENST00000565906 727 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.99□□□□□ -2.25
CNOT1A5YKK6 BX322635.1-201ENST00000605804 496 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 AC002550.2-201ENST00000621246 394 ntBASIC0.99□□□□□ -2.25
CNOT1A5YKK6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.99□□□□□ -2.25
CNOT1A5YKK6 DBF4P1-201ENST00000412976 1892 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms