Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RPL21P10-201ENST00000463521 490 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL135752.1-201ENST00000479477 471 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RN7SL633P-201ENST00000488974 297 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC138853.1-201ENST00000503549 823 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 SCARNA24.1-201ENST00000516465 137 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 HMGB1P41-201ENST00000520234 440 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 TRAV28-201ENST00000557548 323 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC009063.1-201ENST00000563342 702 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL391840.1-201ENST00000571144 367 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC005951.1-201ENST00000576706 485 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC002545.1-201ENST00000592511 181 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC068790.2-201ENST00000602601 557 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC073648.5-201ENST00000603502 305 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL136363.1-201ENST00000605349 337 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 MIR98-201ENST00000606724 119 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL161734.1-201ENST00000609720 557 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 MIR6076-201ENST00000617521 113 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 MAPK10-362ENST00000641864 4484 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 GABRG2-229ENST00000641017 3628 ntBASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL049641.1-201ENST00000441055 1948 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC093908.1-201ENST00000623125 8092 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC073325.2-201ENST00000339545 159 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 SNORA51.4-201ENST00000364993 124 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 SNORD67-201ENST00000390833 111 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL354719.1-201ENST00000406535 843 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 NDUFB4P5-201ENST00000415445 361 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC092047.1-201ENST00000424997 240 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 MED13P1-201ENST00000428342 171 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RPL23AP69-201ENST00000431134 458 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 BNIP3P2-201ENST00000441221 577 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL590664.1-201ENST00000448065 339 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RPL7P5-201ENST00000471472 736 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC068587.1-201ENST00000483613 781 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC105252.1-201ENST00000503089 286 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RNU6-1282P-201ENST00000516735 96 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 ATP5F1P5-201ENST00000526403 760 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC006130.2-201ENST00000586202 326 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC078795.2-201ENST00000602835 1252 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC007363.1-201ENST00000604736 620 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC008962.1-201ENST00000605729 304 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC007619.2-201ENST00000605743 379 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC034102.8-201ENST00000615146 484 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC068831.7-201ENST00000616954 363 ntBASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.8□□□□□ -1.96
TRBV4-1A0A0J9YWV2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC073343.1-201ENST00000328239 651 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RNU6-282P-201ENST00000365357 103 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RNU6-108P-201ENST00000365558 107 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RNU6-1042P-201ENST00000384204 107 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 SAR1AP2-201ENST00000392696 594 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RN7SKP58-201ENST00000411010 305 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AL358934.1-201ENST00000432346 324 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 GOT2P5-201ENST00000433995 546 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 Z82210.1-201ENST00000440037 231 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 DNAJC19P4-201ENST00000440115 345 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC132479.1-201ENST00000449160 144 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 C1DP4-201ENST00000455429 424 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 RPL32P34-201ENST00000486380 400 ntBASIC2.79□□□□□ -1.96
TRBV4-1A0A0J9YWV2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms