Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CKAP2P1-201ENST00000555477 2049 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AL137003.2-201ENST00000606924 2538 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 Y_RNA.58-201ENST00000362807 102 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 Y_RNA.132-201ENST00000363421 102 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 Y_RNA.154-201ENST00000363624 102 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RNY3P1-201ENST00000365085 102 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RNY3-201ENST00000365484 102 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 Y_RNA.490-201ENST00000384413 102 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RNU6-738P-201ENST00000384531 106 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 MIR491-201ENST00000384877 84 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 MIR1183-201ENST00000408856 89 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 HMGB1P12-201ENST00000438594 598 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 PRDX3P3-201ENST00000447765 522 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RPS20P20-201ENST00000460498 340 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RPL7P42-201ENST00000481005 679 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RPS4XP13-201ENST00000483219 789 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RN7SKP18-201ENST00000516005 275 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RNU6-277P-201ENST00000516272 106 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 RNU6-835P-201ENST00000516974 104 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 SNORA70.24-201ENST00000517233 118 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 SNRPGP16-201ENST00000533275 226 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 HIF1AP1-201ENST00000553642 175 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC020661.2-201ENST00000560114 134 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 MIR5187-201ENST00000583479 76 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 VN1R80P-201ENST00000597126 338 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC010591.1-201ENST00000603941 649 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC104662.1-201ENST00000604448 511 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC116312.1-201ENST00000606841 314 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC073346.2-201ENST00000624724 2058 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 AC010733.2-201ENST00000589496 5702 ntBASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC187A0A096LP49 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 BDP1P-201ENST00000582658 1990 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 FAM35DP-201ENST00000323387 2712 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 SNORA69-201ENST00000383895 132 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 RNU6-767P-201ENST00000384132 107 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 MIR183-201ENST00000384958 110 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AL138878.1-201ENST00000405131 347 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 SNORA3C-201ENST00000408792 125 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 VN1R36P-201ENST00000414936 291 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 MTCO2P12-201ENST00000427426 682 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 SAR1AP4-201ENST00000429225 591 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 GTF2IP20-201ENST00000431663 360 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC233279.1-201ENST00000455300 423 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC006512.1-201ENST00000468816 291 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC106707.2-201ENST00000484182 374 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC104619.4-201ENST00000510773 249 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC105417.1-201ENST00000514691 285 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 SCARNA14-201ENST00000516903 136 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 RN7SKP289-201ENST00000517244 295 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AL360157.1-201ENST00000565962 87 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 MIR4644-201ENST00000579929 84 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC018638.8-201ENST00000588755 281 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC020914.4-201ENST00000597690 277 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AC013553.2-201ENST00000604244 589 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 AL355810.1-201ENST00000614629 552 ntBASIC3.69□□□□□ -1.82
CCDC187A0A096LP49 SDR42E1P2-201ENST00000614861 481 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms