Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL445493.3-201ENST00000619568 477 ntBASIC1.37□□□□□ -2.19
TRAV27A0A087WT01 AC025048.6-202ENST00000627667 438 ntBASIC1.37□□□□□ -2.19
TRAV27A0A087WT01 MTCO1P4-201ENST00000520516 1409 ntBASIC1.37□□□□□ -2.19
TRAV27A0A087WT01 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV27A0A087WT01 ZNF702P-202ENST00000434269 1966 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 MIR218-1-201ENST00000384999 110 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 RNU6-796P-201ENST00000391086 107 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AL356432.1-201ENST00000405809 419 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 CYCSP49-201ENST00000420810 319 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AL445669.1-201ENST00000426743 755 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 PSMA6P3-201ENST00000428242 164 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 MTND2P6-201ENST00000455337 1030 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 snoU109.1-201ENST00000459339 135 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 MRPS17P3-201ENST00000465453 385 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AC025181.1-201ENST00000477507 416 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AC091965.2-201ENST00000512324 613 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 Y_RNA.675-201ENST00000516389 149 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 ARL2BPP5-201ENST00000523141 481 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AL022067.1-201ENST00000602426 454 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 MTND4LP5-201ENST00000605152 292 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AC106052.1-201ENST00000608029 497 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 TUG1_1.1-201ENST00000610654 145 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 AC008498.1-201ENST00000613012 531 ntBASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV27A0A087WT01 ADAM3A-203ENST00000461344 2157 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 RNU6-1159P-201ENST00000362933 107 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 MIR514A1-201ENST00000385133 98 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 MIR23A-201ENST00000385245 73 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 RPL7P27-201ENST00000403775 720 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 MIR1289-2-201ENST00000408360 111 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AC023141.4-201ENST00000412031 328 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 PGBD4P6-201ENST00000421501 610 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 RPS15AP5-201ENST00000436276 388 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 MIR892C-201ENST00000516410 77 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AP005639.2-201ENST00000527592 928 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AC008127.2-201ENST00000549925 1075 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AC124947.2-202ENST00000552735 133 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AL133241.1-201ENST00000556832 487 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 NIFKP8-201ENST00000560500 874 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 SULT1C2P1-202ENST00000562418 459 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 DUXAP10-204ENST00000612052 616 ntBASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV27A0A087WT01 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 RNA5SP276-201ENST00000362580 94 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 RNU4-42P-201ENST00000364738 142 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 RNU6-619P-201ENST00000365146 108 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 RNU6-1083P-201ENST00000384022 107 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 SNORA26.9-201ENST00000391322 122 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 HMGB1P17-201ENST00000403495 628 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AL139098.1-201ENST00000407291 389 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AL161449.1-201ENST00000414531 1199 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 HMGB1P49-201ENST00000418882 569 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC096920.1-201ENST00000423991 241 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 BNIP3P2-201ENST00000441221 577 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AL513124.1-201ENST00000450410 614 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AP1S2P1-201ENST00000457344 379 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC055855.1-201ENST00000489563 579 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 SCARNA15.2-201ENST00000516409 127 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 EEF1A1P37-201ENST00000522748 715 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 AC124293.1-201ENST00000530034 493 ntBASIC1.34□□□□□ -2.19
TRAV27A0A087WT01 OR5AL2P-201ENST00000532185 920 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms