Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.54■■□□□ 1.04
PTCH2Q9Y6C5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
PTCH2Q9Y6C5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 RNA5SP419-201ENST00000515908 135 ntBASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 AC099336.1-202ENST00000602961 463 ntBASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTCH2Q9Y6C5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTCH2Q9Y6C5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 AP001005.1-201ENST00000571755 1248 ntBASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PTCH2Q9Y6C5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 FAM220CP-201ENST00000395253 831 ntBASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 TP73-AS1-207ENST00000624167 988 ntBASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCH2Q9Y6C5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 Z83836.1-201ENST00000624605 1642 ntBASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 KRT18P58-201ENST00000527480 1120 ntBASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTCH2Q9Y6C5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms