Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.71■□□□□ 0.91
Rtn4Q99P72 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtn4Q99P72 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Gm7153-201ENSMUST00000117092 455 ntBASIC20.7■□□□□ 0.9
Rtn4Q99P72 Gm13186-201ENSMUST00000118031 316 ntBASIC20.7■□□□□ 0.9
Rtn4Q99P72 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rtn4Q99P72 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Gm37436-201ENSMUST00000193842 1085 ntBASIC20.69■□□□□ 0.9
Rtn4Q99P72 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rtn4Q99P72 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.68■□□□□ 0.9
Rtn4Q99P72 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Gm24589-201ENSMUST00000116692 94 ntBASIC20.68■□□□□ 0.9
Rtn4Q99P72 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.68■□□□□ 0.9
Rtn4Q99P72 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rtn4Q99P72 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Gm35638-201ENSMUST00000220724 652 ntBASIC20.67■□□□□ 0.9
Rtn4Q99P72 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.67■□□□□ 0.9
Rtn4Q99P72 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn4Q99P72 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rtn4Q99P72 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn4Q99P72 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn4Q99P72 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rtn4Q99P72 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms