Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Gm13216-201ENSMUST00000117145 591 ntBASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rdh1Q8CGV4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Gm44771-201ENSMUST00000206975 626 ntBASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rdh1Q8CGV4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Gm6376-201ENSMUST00000209407 580 ntBASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Gm6296-201ENSMUST00000222599 943 ntBASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rdh1Q8CGV4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.72■□□□□ 0.11
Rdh1Q8CGV4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh1Q8CGV4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh1Q8CGV4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh1Q8CGV4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh1Q8CGV4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh1Q8CGV4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rdh1Q8CGV4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms