Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rd3Q8BRE0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Gm12350-201ENSMUST00000121208 462 ntBASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Gm15173-201ENSMUST00000122049 433 ntBASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rd3Q8BRE0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rd3Q8BRE0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rd3Q8BRE0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Gm4535-201ENSMUST00000182274 558 ntBASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Gm5364-201ENSMUST00000216789 889 ntBASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Gm10355-201ENSMUST00000097146 517 ntBASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rd3Q8BRE0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Gm11594-201ENSMUST00000122313 162 ntBASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rd3Q8BRE0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Gm25990-201ENSMUST00000102440 86 ntBASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Gm37935-201ENSMUST00000192012 982 ntBASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rd3Q8BRE0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms