Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab39aQ8BHD0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Rab39aQ8BHD0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Rab39aQ8BHD0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab39aQ8BHD0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.05■□□□□ -0
Rab39aQ8BHD0 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.05■□□□□ -0
Rab39aQ8BHD0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rab39aQ8BHD0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.04■□□□□ -0
Rab39aQ8BHD0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.04■□□□□ -0
Rab39aQ8BHD0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Rab39aQ8BHD0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Mir5122-201ENSMUST00000175004 89 ntBASIC15.04■□□□□ -0
Rab39aQ8BHD0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Gm10252-201ENSMUST00000209541 832 ntBASIC15.04■□□□□ -0
Rab39aQ8BHD0 Timm23-208ENSMUST00000226683 750 ntBASIC15.04■□□□□ -0
Rab39aQ8BHD0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rab39aQ8BHD0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Gm24841-201ENSMUST00000158676 357 ntBASIC15.03■□□□□ -0
Rab39aQ8BHD0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.03■□□□□ -0
Rab39aQ8BHD0 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.03■□□□□ -0
Rab39aQ8BHD0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rab39aQ8BHD0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.02■□□□□ -0
Rab39aQ8BHD0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rab39aQ8BHD0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab39aQ8BHD0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rab39aQ8BHD0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab39aQ8BHD0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab39aQ8BHD0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rab39aQ8BHD0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms