Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Gm9013-201ENSMUST00000132939 882 ntBASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Gm25016-201ENSMUST00000158399 131 ntBASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Gm7977-201ENSMUST00000193787 748 ntBASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syne3Q4FZC9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 AA414768-201ENSMUST00000121924 1257 ntBASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syne3Q4FZC9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syne3Q4FZC9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syne3Q4FZC9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Syne3Q4FZC9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne3Q4FZC9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Syne3Q4FZC9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Syne3Q4FZC9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms