Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Mir5122-201ENSMUST00000175004 89 ntBASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Mir6982-201ENSMUST00000184354 68 ntBASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa3Q3UPR0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa3Q3UPR0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.02□□□□□ -0.16
Shisa3Q3UPR0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Gm37055-201ENSMUST00000191866 133 ntBASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Shisa3Q3UPR0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.01□□□□□ -0.17
Shisa3Q3UPR0 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms