Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.48□□□□□ -0.25
Trim63Q38HM4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.47□□□□□ -0.25
Trim63Q38HM4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.47□□□□□ -0.25
Trim63Q38HM4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim63Q38HM4 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.46□□□□□ -0.25
Trim63Q38HM4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.46□□□□□ -0.25
Trim63Q38HM4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim63Q38HM4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim63Q38HM4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim63Q38HM4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim63Q38HM4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Mir8112-201ENSMUST00000184382 131 ntBASIC13.45□□□□□ -0.26
Trim63Q38HM4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.45□□□□□ -0.26
Trim63Q38HM4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms