Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Gm18284-201ENSMUST00000172604 624 ntBASIC13.68□□□□□ -0.22
Npas1P97459 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.68□□□□□ -0.22
Npas1P97459 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Npas1P97459 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.68□□□□□ -0.22
Npas1P97459 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Npas1P97459 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Npas1P97459 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.67□□□□□ -0.22
Npas1P97459 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.67□□□□□ -0.22
Npas1P97459 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Npas1P97459 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npas1P97459 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.66□□□□□ -0.22
Npas1P97459 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.66□□□□□ -0.22
Npas1P97459 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Gm2559-201ENSMUST00000201323 363 ntBASIC13.66□□□□□ -0.22
Npas1P97459 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.66□□□□□ -0.22
Npas1P97459 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Npas1P97459 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npas1P97459 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Npas1P97459 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.65□□□□□ -0.22
Npas1P97459 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Npas1P97459 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.65□□□□□ -0.22
Npas1P97459 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Npas1P97459 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Npas1P97459 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Gm5408-201ENSMUST00000197998 747 ntBASIC13.65□□□□□ -0.22
Npas1P97459 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Npas1P97459 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Npas1P97459 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Npas1P97459 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Npas1P97459 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Dio3-201ENSMUST00000097228 1449 ntBASIC13.64□□□□□ -0.23
Npas1P97459 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
Npas1P97459 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms